FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002878422

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002878422
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2476
Sequences flagged as poor quality0
Sequence length71
%GC32

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA42317.084006462035543No Hit
AGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCTTGTGGTAATATGATGTGCCTTTCCTTGC170.6865912762520193No Hit
CCTTGGAAAAGGTGTGTGCTGACTTGATAAGAGGCGCAAAAGAAAAGAATCTCAAAGTGAAAGGACCAGTT150.6058158319870759No Hit
CATATGAACATTCATTTTTAAATGCTCAGCCTCAAGTGCAGGCATTTTTGAGTGGCCTGATTACATATTCC120.48465266558966075No Hit
ACAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGG120.48465266558966075No Hit
AAAGATGGGTCCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGAAAACGCCCATGCAGTTTG120.48465266558966075No Hit
GAGCTAAAACCACCTAATGCTCTTATGGCACAGCTGTGTATAGATTTAGTTCTCTTTATACTTCATTTCTA110.44426494345718903No Hit
CCCATGATACTTTTGGTACAACTTATGGAAGGATTCATATGCAGAAGCAAGACCTAAGCAAACTACAAACC110.44426494345718903No Hit
CCGTGGGCTGTTACTTGCTTTGAGTTGGAAGCGGTTTGCATTTACGCCTGTAAATGTATTCATTCTTAATT110.44426494345718903No Hit
GTCATGTGTATGCAGCTCTTCGGTTTCCTGGCTTTCATGATATTCATGTGCTGGGTGGGGGACGTGTACCC100.40387722132471726No Hit
ATGCCTATTTATAACCACTGAATGCACTGACTTTCAAAAACTGAGGTGGGGTGTGTGTTACGAATGGGCTT100.40387722132471726No Hit
CCGCGGCTTCAGCCTGGAGGAGCTCAGGGTGGCCGGCATTCACAAGAAGGTGGCCCGGACCATCGGCATTT90.36348949919224555No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG80.32310177705977383No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA80.32310177705977383No Hit
GGGTGATACTTCTTGCTTCTCATGATGCATGTTTCTGTATGTTAATGACTTGTTGGGTAGCTATTAAGGTA80.32310177705977383No Hit
CCTCCTGGATCTCCCCGCCGCAGCCTCCTCAGAAGACATCGAGCGGTCCTGAGAGCCTCCTGGGCACGTTT80.32310177705977383No Hit
CCTTTTTCCATATCAGTATAATAAAGGAGTGATGTGCAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.32310177705977383No Hit
CTGTCCAAACTGCCTAAGCCCTCCGCCATTCTCAAGCCCTGCAGTCACAGCTACACAGATCACAGCTTCAG80.32310177705977383No Hit
ATCTATCATGACCCTTTCACGTGGACCCCTTAGAGTTGTAAGCCCTTAAAAGGGCTAGGAATTTCTTTTTG80.32310177705977383No Hit
GGCTAACATGGTGAAACCCATCTCTACTAAAAAATACAAAAAAAATAGCTGGGCATGGTGGCACACGCCTG80.32310177705977383No Hit
GAAGAGGAGGAGAGGGGAGGGGACCAGCCCCCTCCTCAGGCATCTGGGAGGGCCCTGCCCCCATGGGCTTT80.32310177705977383No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA70.28271405492730206No Hit
GTGTTGCACAGTCTTCCAGCAGTTCGGCAGTATCTGTTTTCACTCTATGAATGCCGTTACTCTGTTTTCTT70.28271405492730206No Hit
CCACATACTGATGACAATAATCTATACTTTGAACCAAAAGTTGCAGAGTGGTGGAATGCTATGTTTTAGGA70.28271405492730206No Hit
CAGCAACATAGCTACCCCATCTCTACCAACAACAACAAAAAAATCAGCTGGGCCTGGTGGTGCATGCCAGT70.28271405492730206No Hit
GCCGAGCGCCTGCGCATCAGCCCGGACAGGGTCTACATCAACTATTACGACATGAACGCGGCCAATGTGGG70.28271405492730206No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT70.28271405492730206No Hit
ACCTAAACGAGAGCATTTACAATATTTATATGAGAAGCTGGCAACTGGTGAGAGTATAGCAGTCAAAAAAA70.28271405492730206No Hit
GCTGTCTTTCTGAGATCTAATTCCAAGGACTTCTCCACAGCTAAGTGAGATGCCTCACACCATTAGGTGAT70.28271405492730206No Hit
GGAGATGAAGATGAGGAAGCTGAGTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGT70.28271405492730206No Hit
CTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAA60.24232633279483037No Hit
CTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.24232633279483037No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.24232633279483037No Hit
GGGTGTGCTGGGCATCAAGGTGAAGATCATGCTGCCCTGGGACCCAACTGGTAAGATTGGCCCTAAGAAGC60.24232633279483037No Hit
CGACGCGGGGATGAAACTCATGTCAACTGAAGTGAGTGTAATCTCAGATATCAACATTATTATATTTTAAA60.24232633279483037No Hit
GCTACACTACAGGACACCCAGCATCGGCTTTGACTGCAGACTGTTCACCCACACGAGCCCTGTGCTTTTGG60.24232633279483037No Hit
GGACTCTGGGTTCCTGCTCTGTTCTGGGGTCCAAACCTTGGTCTCCCTTTGGTCCTGCTGGGAGCTCCCCC60.24232633279483037No Hit
GGTGCTGGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCATGAGACAG50.20193861066235863No Hit
GGCTGAGGCAGGACAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGTCGAGATTGCACCATTGCACT50.20193861066235863No Hit
GCACTAAAAGCACTCTGAGTCAAGATGAGTGGGAAACCATCTCAATAAACACATTTTGGATAAAAAAAAAA50.20193861066235863No Hit
CTATATATGTATTATCAAATATGTAAGAATACAGGCACCACATACTGATGACAATAATCTATACTTTGAAC50.20193861066235863No Hit
CCTAATTAAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCTTTGTAAAATTGACAGAGAGGGGA50.20193861066235863No Hit
ACCATAAAGCACTCCTGTTTCACTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
CCCCTGCCCATGCCTGTCCTGCACGGCTCTGCTGCTCGGGCCCACAGCGCCGTCCCATCACAAGCCCGGGG50.20193861066235863No Hit
ATATGTAAGGCCTTTCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
CACACATATATATGTATATATGTATACACACACACACATATATATATGTGTATATATATACACATATATAT50.20193861066235863No Hit
TCCCTACACGACGCGGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
CCACACTCCAGCCTGGGTGACACAGTAAAACCTCACTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
GCCCGTATTTACCCTATAGCACCCCCTCTATCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
CCATCTCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
CATAATGTATTGCTAGATTACTGTAGCTGAATATAAAAAGAAAGCAGTAATGCAGGAACATTCTATCCATT50.20193861066235863No Hit
CATCTATATTAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.20193861066235863No Hit
ACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCC50.20193861066235863No Hit
CTCCAGGCCTGGTCCACGGACTGGCAGGGACCCCAGGCACAAGAGCTGCCACCCCTCTGCCCGGTTTTGGA50.20193861066235863No Hit
TGGAGGAGAAGAAAGCATTCATGGGACCACTGAAGAAAGACCGAATTGCAAAGGAAGAAGGAGCTTAATGC50.20193861066235863No Hit
ACTTTGTTACTGTGCTGTGAAAGATTACAGATTTGAACATGTAGTGTACGCGCTATTGAGTTGTGAACTGG50.20193861066235863No Hit
CGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCACCCCCTCTACC40.16155088852988692No Hit
TCCCTACACGACGCGGGTGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGGTGGTGGATCAC40.16155088852988692No Hit
ACTCCTGTCTTGCTAGACAAGGTTGCTGTTGTGCAGTGTGCCTGTCACTACTGGTCTGTACTCCTTGGATT40.16155088852988692No Hit
ATCTTAATTACTTTCAGAATATTTTCAAAATAGATATATTTTTAAAATCCTTAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
CTCTAAATCCATTTCCCTAAAACACTGTTCATCAGGTACCACAGCAGTTTTTAAAATATATGTATTCTCTT40.16155088852988692No Hit
ATGCAGAGGAGAAGGAGATCCAGAGTTCCAATCTGGAGACGGCCATGTCTGTGATTGGAGACAGAAGGTCC40.16155088852988692No Hit
TTCCCTACACGACGCGGGTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
CTGCCATCCCAGCCAAGGGGGCAAAGAATGGCAAGAATGCCAAGAAGGAAGACAGTGATGAAGAGGAGGAT40.16155088852988692No Hit
TGCTTTAATTTGCAATTTAAAATGAAGGGGTTAAATAAGTTAGACATTTAAAAGAAATGATTGTTACCATA40.16155088852988692No Hit
AAAGTTATGTGAATGTGGTCTCTTTCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
TTCGTAGGATGGGTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGATGGCATCGTCTCAAAGAAC40.16155088852988692No Hit
AATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCACCCCCTCTACCCCCTCTAG40.16155088852988692No Hit
CCCTTTGTGCTGAACACCAAATCAACCTAATTAAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGC40.16155088852988692No Hit
GTTCTAAGACTAAATAAAGCTCCTATTCATCTTCTTCACCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
TTGCAGAGGTGTGCATCACCTTCGACCAGGCCAACCTGACCGTCAAGCTGCCAGATGGATACGAATTCAAG40.16155088852988692No Hit
ACCTATCACACCCCATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
GTATGAAATGAGAACACTTTACAGATGTTTAGAGTTAGAACATCTAACTGGAAGCACAGCAGATGTCTACT40.16155088852988692No Hit
GTCACGGCCTGCAGACCCACCAGCATCAGCTCCAAGACTCTCTGCTCGGCCCCCTCACCTCCAGTCTGGTG40.16155088852988692No Hit
GGATTAATAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
ACGCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTA40.16155088852988692No Hit
GCATAGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
AGAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
GCCTGTATCAGACAGGTGAAATTGCAAGCAGTTATACAAGTAGTGTACTAACTTCTCATAAAGCCTACTCA40.16155088852988692No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
CCACTTTAGACCCTATGTGTAGCAGGTCACAACTTACCCTTGTGTGTTTAGATGTGTATGAAATACCTGTA40.16155088852988692No Hit
AGTGATCCTGTTTGAGCCTCTCAGGAAGCATTGATGAATCATTCCACCAAGAAAACAAACAAGCACCTACC40.16155088852988692No Hit
GTTACATTTTGAGGATAATAAAGGTGTGTGATCTGGTTTGGTACAAAAAAAAAAAAAAAAAAAAAAAAAAA40.16155088852988692No Hit
GAATACTGCCTAACTCTGGAAATGTAGGAAAAGTCAGCATTCTTTAGGTTCAAGATATTAAGTTTAAATAG40.16155088852988692No Hit
GCTATTAGCCAGGATCATGGTGTAATAAGACATAACGTTTTTCCTTTAAAAAAATTTAAGTGCGTGTGTAG40.16155088852988692No Hit
ATAATCAAGTCTTTTACTCATCTAGAAATGGGAGCATGGTTTTGATCATTTTGAAATGCAACTTTATGAGT40.16155088852988692No Hit
TGGGAGGCCCAGGCAGGAGAATCGCTTGAGCCCGGGAGTTTGAGACCAGTCTGGGCAACATAGCGAGATCC40.16155088852988692No Hit
GCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGAGCTCTCTCCCCGACACATTTGTTAAAATCAAACCTGA30.12116316639741519No Hit
GGAGAAGATTAAGAGTGTTGGGGGGGCCTGTGTCCTGGTGGCTTGAAGCCACATGGAGGGAGTTTCATTAA30.12116316639741519No Hit
GGGTTTTAAGTTATAAATGTTAACTGCCTCTGGGTGAAAAAGTTTTTAATAAACACCTATTACCTCTTGAA30.12116316639741519No Hit
GTTTTGATTTTTAGATACACAAATAAATAAGAACATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
GGACCTCATACCCTTCCCCAACACTACCTGGAAGTTGTGCCTTCCTCATGAAACTGGCAGAAACCCCTTCC30.12116316639741519No Hit
GTGGGGTATGTCATTGTGATGTGAGAAGAAAATATCAGAACTTCTACTTGTACTTATTTTTATCAAAAACA30.12116316639741519No Hit
GATCCAAGATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATG30.12116316639741519No Hit
CTCCTGTCTTCTAGGAGCTATCAAGGGTCTCTAAGAACTGGGCATGGGGCACTCCTAGCCAGTGAGTCATG30.12116316639741519No Hit
CCACTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGACAAATTGTGGACTTTGGTCAGTGAAC30.12116316639741519No Hit
AAACCCACAGATCCTAGCAAATGTGCCCAACCAGCTTTACTAAAGGGGGAGGAAGGGAGGGCAAAGGGATG30.12116316639741519No Hit
GAGCCCTGTTTCCCAGCACCGCGGAGCTGCACTGCACACCTGTGGGGAGACTTTTCCAGCTGGGCCAAGGG30.12116316639741519No Hit
TCCTTTCCCGCGCGACCGGCGAGGGAGGAAGAAGCGCGAAGAGCCGTTAGTCATGCCGGTGTGGTGGCGGC30.12116316639741519No Hit
GGTTGATGGAGTGCTTACTAAGTGTCAGTATGGTCATTAAGAGCAACGCTTCCAGTCAGTGGCCTTGGCTT30.12116316639741519No Hit
CTATTCACATACAATTGAGGAAGAAGCAAGCTGTCCAACGGAGTTAGATGTAATGGGATGATTCATCTATG30.12116316639741519No Hit
TTCCCTACACGACGCGGGTGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
GTGCGTGCACAGATGAAGAACCTTGTGCTCACCATCACAGAGAAAGAGGAAGGGGCTGGTTCTGTAAATCA30.12116316639741519No Hit
GGAGAGAGTGAAGGGACACGGGAAGAATCAAAGTCGAGCATGAAAGTGTCTGCAACTCCAAAGATCAAGGC30.12116316639741519No Hit
GATGAAAAATTATAACCAAGCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAACTA30.12116316639741519No Hit
CCATCCAAAAGACCACCACCCGCCGGATAGTGGATGGCAAAGTGGTGTCTGAGACCAATGACACCAAAGTT30.12116316639741519No Hit
CTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCAC30.12116316639741519No Hit
CCCTACACGACGCGGGGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
TCTTTATCCAGGTCTTACCCAGTCAGGCTAATTCCAGAAACTTGTGGTTTTTAGTATAGTCTGTCTACCTT30.12116316639741519No Hit
AACTTAGATGGTTTTTGAAGCCTATACAATTGGTATTGTTTGACCCTTAAGCTTTTACATCTCTTAGCATG30.12116316639741519No Hit
CCCGTCCCGGAGACTGAAATGGGCCTGGGTCTTCTCCTTGTCCTGTGATTAAAGTCCTCTCTTGAAAGTGG30.12116316639741519No Hit
GAATCACAGATGTGGAATATTTGTCATAAATAAATAATGAAAACCTAAAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
GATCTTCGTGAAGACCCTGACCGGCAAGACCATCACGCTGGAGGTGGAGCCCAGTGACACCATCAAAAAAA30.12116316639741519No Hit
ATATACATCCTGAAAATCATTTAGAGAGTCTTTTATTTATAAATTAAAAATCACTTCATTTTCACAAAAAA30.12116316639741519No Hit
TATTTACCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
GGTTTTCAATGTGTTTTTTAGTGTTGTCACTTGTTTATAGATAAATATATAAATAACCTGTTTGGATCCTG30.12116316639741519No Hit
ACACCCTGATTCGGCCTGATGGAGAGAAGAAGGCATATGTTCGACTGGCTCCTGATTACGATGCTTTGGAT30.12116316639741519No Hit
GTTTCATTTTCATGACATATCAATTTTTGCCCAACATTAATAAAGCTGACAAACTCGTTGAAATGGAAATG30.12116316639741519No Hit
ACATAAGGCAGTTACTTAATGTGATTTTTAACCCTTAAAAAAGTGGAGATGTATACATTTGTTAACAATGC30.12116316639741519No Hit
CAGTTGGTGTGGCTGGTTCAGGGGCTGGCATTGGAACCGTGTTTGGCAGCTTGATCATTGGCTATGCCAGG30.12116316639741519No Hit
ATCTATGTCTCTGAAAAAGGAACTGTTCAGCAGGCTGATGAATAAGATCTAAGAGTTACCTGGCTACAGAA30.12116316639741519No Hit
GCTAAATGTAACAGTCTGATCGTGACGCTGAATAAATGTCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
GAAACAGATCCTAAGCCATAGACAGGCTAATTGCCCACCACTCCCAGGAATATTGAAATAGCTACATGACC30.12116316639741519No Hit
TCCCTACACGACGCGGGGTAGAAAGCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.12116316639741519No Hit
GATTGTCTGTGACACTCAAGCCCCTCTCATTTTTATCTGTCTACCTCCATTCTGAAGAGGGAGGTTTTGGT30.12116316639741519No Hit

[OK]Adapter Content

Adapter graph