FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002878424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002878424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3790
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA82521.767810026385224No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG230.6068601583113457No Hit
GGATCTATCAAGTGAACAAAAGAGCCAAAGATATTCACCCAAAACGAAACACTTGCAGAAAACATAAAAGG190.5013192612137204No Hit
GGCCAAGGCCGATGGCATCGTCTCAAAGAACTTTTGACTGGAGAGAATCACAGATGTGGAATATTTGTCAT180.47493403693931396No Hit
TCTTACTACTTTGACCGCGATGAAGTGGCTTTGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGA180.47493403693931396No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT170.4485488126649077No Hit
GGTTGGCTCCATGACCAAGATCTATGGGGGACGTCAGAGAAACGGCGTCATGCCCAGTCACTTCAGCCGAG170.4485488126649077No Hit
ACCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCCGAGGTCGAGAGTTTGAGACCAGCCTGACCAACG150.395778364116095No Hit
GCACGCTGTCACCTCTCACAGGGAACTGTGAAGACTAGAGTGACCTTGGAGATCTCATCTGGAAGATGGTA150.395778364116095No Hit
ACTCAGAAGAGGTGCTGGGTCACTTTCCGTATCCTGATCCTTCCCAGTGGACAGATGAAGAATTAGGTATC150.395778364116095No Hit
CTTTAAGGGTTTTATACGCATCAGCTGTTGCCAGTACTGTAAAATAGAATTTCACATGAATTGCTGGAAGA150.395778364116095No Hit
GTGGGAGGCCCAGGAGGGCAGACTGCCTGAGGTCAGGAGTTTGAGACCAGTCTGGCCAACATGGTGAAGCC130.34300791556728233No Hit
TTGTATTATAAAAACTTGGTGTGGGGGAGGAGCACAAAACTCCAGCCCACTGAACCTCTGCCAATTAAGAT130.34300791556728233No Hit
ATTTGAAACAACGAAGTGCTGGGGAGGGAAAGAAGGAAAAACAGAAAAGAATATATGGATGACTCCCACTG120.31662269129287596No Hit
CGATGATGTGGCTTTGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTG120.31662269129287596No Hit
GGATAGTTCAGGTATAATTGTCCAAAATAACCTAACTGCAGCAGAAATGTAGCACAGTTGCTTAGTACAGG110.29023746701846964No Hit
CTGTAAATGACCTCCCTGTTGGCCGCTCTGTGGATGAGACTTTGAGACTAGTTCAGGCCTTCCAGTTCACT100.2638522427440633No Hit
CACTTGGCCTCAGCTGGCTGTATGGAAATGCACCCTCCCTCCTGCCGCTCCTCTCTAGAACCTTCTAGAAC100.2638522427440633No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.2638522427440633No Hit
CGAGTAGAAGAGAACTTCTTGAAACTGACACATGTGCAAAGACAGGAAGCAGCACAGTCTCGGCGGGAGGA100.2638522427440633No Hit
CCCTAGAAGAATGGTTGCTGATATGGCTACTGCTTCTACATCTTGAGTTTTTTAATTTACTTTTTTTACAC100.2638522427440633No Hit
GCATTGATTGTCTTATATTTCAAGTTAAGGTCCAAAAAAACTCCAGCTGTGAAAGCAACATAAATGGATTT100.2638522427440633No Hit
GTGCTTCAGGGCACCTCTGTGGCTTCTGTGTACCATGGGAAAATTCTCATAGGCACCGTATTTCACAAAAC90.23746701846965698No Hit
GTTTTATACGCATCAGCTGTTGCCAGTACTGTAAAATAGAATTTCACATGAATTGCTGGAAGAAGTTAAAA90.23746701846965698No Hit
GGGAAGGAAAGAACTTGCATGTTGGTGAAGGAAGAAGTGGGGTGGAAGAAGTGGGGTGGGACGACAGTGAA90.23746701846965698No Hit
GGAAAAATGTGCTGGTGGTAGCTGCAGCAGCCCTTGGAATTGCTTTTGTCGAGGTTTTGGGAATTGTCTTT90.23746701846965698No Hit
GGGTTGGAAAAGCTCAAACATCTAGACTTTCTGAAGCAGCCACTGGCCACCCAAAAGGATCTCACTGGCCA90.23746701846965698No Hit
TGGAGAACCCCTGTCTCTACTAAAAATACAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAATCCCAGCT90.23746701846965698No Hit
CATTGATTAAGGAAGCATTTTCCTGATTGATGAAAAAAATAACTCAGTTATGGCCATCTACCCCTGCTAGA80.21108179419525064No Hit
GCCCCCATTACCAAATACCATTTTTGCCTGGGGCTTGTGCAGCTGGCAGTGTTCCTGCCCCAGCATGGCAC80.21108179419525064No Hit
GGTACTAGAGTTGATAAATGTGTACAGGGTCCTTTTGCAATAAAACTGGTTATGACTTGAAAAAAAAAAAA80.21108179419525064No Hit
TGATGTGGCTTTGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGAGGAGAAGGAACATGCTGAGA80.21108179419525064No Hit
GAAAAACTCCTTGTGGTGAAGGTTCTAAGACGTGGGATCGTTTCCAGATGAGAATTCACAAGCGACTCATT80.21108179419525064No Hit
GGTGAGGGGTGGTGCATGTTGAGATTTAAATTGGCATAAAGCTGCATACTTTTTGTCTAGCTGTTTGATTT80.21108179419525064No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAGTTATGTCATCCCTCTTATTAA70.18469656992084432No Hit
GCTGATGAAGGCATCTCGTTCAGGGGCCTTTTTATCATTGATGATAAGGGTATTCTTCGGCAGATCACTGT70.18469656992084432No Hit
CGACGAGCTCCGCTTTCGCTACAGCATGGTGGCCTACTGGAGACAGGCTGGACTCAGCTACATCCGATACT70.18469656992084432No Hit
GCCTTATTATTGACTGTAGTTTTGATCACTTGATGGTATTAAAGGACATTAAGAAACTTCATAAGCAGATT70.18469656992084432No Hit
TGTGTAACGAATTCTTTGAAGGCTTCCCAGATAAGCAGCCCAGGAAGAAATGAAAACTCCTCTGATGTGGT70.18469656992084432No Hit
GTGTTTCCGTCAGTACGCGAAGGATATCGGTTTCATTAAGTTGGACTAAATGCTCTTCCTTCAGAGGATTA70.18469656992084432No Hit
CCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACA70.18469656992084432No Hit
AGAATATATGGATGACTCCCACTGTGATTAAGAAAAACTGAGAACCACAGAAAAGGAAGAACACAGACATC60.15831134564643798No Hit
CTCAACTAATATCTATGTTCCCTTTCCTCATTTCCTTGAAGGAAGAATCAAAAATCTTCACCACTCTTGAC60.15831134564643798No Hit
GCAAGAGCTGGAGAGGGAGCTTTTTAAGCTCAAGCAAATGTTTGGTAATGCAGACATGAATACATTTCCCA60.15831134564643798No Hit
CAATTAGGTCACTTAACATCTTATATTAGCTGCTCATTTCATTTGGGAGCAAGGAGAACTGGGTTCTCATT60.15831134564643798No Hit
GTGTGGTGGCGCACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGACTTGAACCCAGGAG60.15831134564643798No Hit
TCCCTACACGACGCGGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.15831134564643798No Hit
CTATCAAAGAAAGATGAAATAATAAAACTATTATATAAAGGGTGACTTACATTTTGGAAACAACATATTAC60.15831134564643798No Hit
AGGCAGGTGGATCACGAGGTCAGAAGATCGAGGCATGGTGGTGTGCACCTGTAATCCCAACTACTCAGGAA60.15831134564643798No Hit
GTGCTTGGCAAGCATTTGAAAAACAAATGGGAATAAAGGAGTGAGTGACTGAGGGAGAGCTGTTCTGCAGC60.15831134564643798No Hit
GTCCGAGTACCAGCAGTACCAGGATGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGG60.15831134564643798No Hit
CTTTTGGACTGGGCTGCCACTGCTTGGGCAGAGTAAAAGGTGCCAGGAGGAGCATGGGTGTGGAAGTCCTG60.15831134564643798No Hit
TGTGCTGAGTGGGTGTCTCTCTCAAAGGCCAGGATTGTAGAATATGAGAAAGAGATGGAGAAGATGAAGAA60.15831134564643798No Hit
GTCATGCAATAAATGTTCTGGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.15831134564643798No Hit
CCCTTGCCCTCAATAAATAAAGTTCTTTTTTAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.15831134564643798No Hit
CTGTATTTTTCTTCTGTCAGTACCCTTAGGATACACTTTAAAACACCTTAAGGTCTGATGTTATGGCAACA60.15831134564643798No Hit
GAATTGGGTGACCACGTGACCAACTTGCGCAAGATGGGAGCGCCCGAATCTGGCTTGGCGGAATATCTCTT50.13192612137203166No Hit
TCCCTACACGACGCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCC50.13192612137203166No Hit
ATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
ACAGCATTAAAGACTGATGCTAAACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
GACCTAATGATTAAAATTATAGTGATGAAATAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
GTAGTGTACTTAACTACAGGCTAGAATCTACAGCTGGTATAGTTTAGATGTGTGTCCCTTCCAAATCTCAT50.13192612137203166No Hit
GTTTTAGAGTTGGAAAAAAGCCTGATTAAAGAGTTTCTGCCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
AGTTTAAATGACTGTGCTGCCCCTTTCACATCAAAGAACTACTGACAACGAAGGCCGCGCCTGCCTTTCCC50.13192612137203166No Hit
AGTTTCAGGCGCACAAACCCGCAAAGAGTAAGACGGCAGCGGCAGCCTCTGAAAAGAATCGGGGCCCAAGA50.13192612137203166No Hit
AAAGTCTAGCTCACCAAAGAAAAAGATCAAGTTGAAGAAAAGTAAAAATGTAGCAACTGAAGGAACCAGTA50.13192612137203166No Hit
GTCCAGAGCCTATTATTATGGAAACAATAAAATTTATTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
CATGATCAGTGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
ATCACACCCCATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
GAATAAATCTGCAGAGGAGTGGCCAGAGAGGTTGGAAGAAAACCAAGATATTGTTATAGAGAAGCCAAGGA50.13192612137203166No Hit
GATCGAGACCATCCTGGCTAACACGGTGAAAGCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTG50.13192612137203166No Hit
GGTCAGGAGATCCAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACGAAAAAAATTA50.13192612137203166No Hit
GATCTTCCCTTAGTCAACAACAGAAAACTCTCACCAGATAATATGCCTCAAAGGACCTTCCACCGGATCCT50.13192612137203166No Hit
TCCCTACACGACGCGGGGCCCGGGCGCGGTAGCTCACGCGTGTAAACCCAGCACTTTGGGAGGCCGAGGCG50.13192612137203166No Hit
GATTTTTGAAGTATGCTTTTTAATTTTTTTCTGGTATTTTCTAGATTTAAAAGTTTAGATTTTTAAATCTT50.13192612137203166No Hit
TGACTGGGTCTATGAATAAGAGGTGGACACAACAGCAGTCTCCTTCAGCACGGCGTGGTGTGTCCCTGGAC50.13192612137203166No Hit
GAGGGTGACAAGTTCAAGCTCAACAAGTCAGAACTAAAGGAGCTGCTGACCCGGGAGCTGCCCAGCTTCTT50.13192612137203166No Hit
TCAACCAGTTAGCGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACCAAAGTAGTTCTAG50.13192612137203166No Hit
GCCTGCCTTGCTGTTCCTGGGAAGATGCCATAGTTTTCGTTACTGGATGTTTGGAGTAGATACTGGTCTGT50.13192612137203166No Hit
CCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.13192612137203166No Hit
CCCTGGAGGAGAAGAGGAAAGAGAAAGCCAAGATCCACTACCGGAAGAAGAAACAGCTCATGAGGCTACGA50.13192612137203166No Hit
AATTTGAAGTGAAAGATCCTGAGCTGGAGGCCCAGGGAGATGACATGGTTTGTGATGATCCGGAGGCTGGG50.13192612137203166No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATATGGCCCGTATTTACCCTATAG50.13192612137203166No Hit
GGATTTGGTGTCACATACCAACTGGTATCAAAAATCTGCCCCCTGATGATTTCTCGAAACCACTGTGTTTT50.13192612137203166No Hit
CCATGAGAACAAAACCTCTTCTGTATTTTTTTTTTCCATTAGTAAAACACAAGACTTCAGATTCAGCCGAA50.13192612137203166No Hit
GGAATTGACGGATTACCAGTTGGTCTCCCCTGCCAAGAATCCCTCCAGTCTCTTCTCAAAGGAAGCACCCA50.13192612137203166No Hit
AGTCACGCATGTATGGGGAAGTAGTCTCGGGTATGCTGTTGTGAAATTGAAACTGTAAAAATAGATGGTTG50.13192612137203166No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA40.10554089709762532No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA40.10554089709762532No Hit
AACACAGCACCGTGCTGGAACCGGCTCCTGAGCTGCTCAACCTCAGAACTAAAATGGCCTCGAGCCAGGTG40.10554089709762532No Hit
CTACACGACGCTCTTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
GACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTGCCACCTATCACACCCCATCCTAAAA40.10554089709762532No Hit
TCCCTACACGACGCGGGGAAAAAAGAAGAAAAAAAATAAAAAATAAAAAAAAAAAAAACAAAAAAAAAAAA40.10554089709762532No Hit
TCGAAAAGTGTTATTTTTGTTCGGGGCCCATCTATCCTGGACACGGCATGATGTTCGTCCGCAACGATTGC40.10554089709762532No Hit
CTGTAAATGTATTCATTCTTAATTTATGTAAGGTTTTTTTTGTACGCAATTCTCGATTCTTTGAAGAGATG40.10554089709762532No Hit
AGGTACTAGAGTTGATAAATGTGTACAGGGTCCTTTTGCAATAAAACTGGTTATGACTTGAAAGAAAAAAA40.10554089709762532No Hit
AATAAAAGGATTATGTATTTTTAACTAAGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
ATTCTGAACTAGTTAGTGCAGCTTTTCATTGTGTTGTGTGGTTGGTCTCATAACTAGGTTGAGTTTTTCTC40.10554089709762532No Hit
GATTGCTTGTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
GCATAAGAAGAAGAACCCAGATGCTTCAGTCAAGTTCTCAGAGTTTTAAAAGAAGTGCTCAGAGACATGGA40.10554089709762532No Hit
GCTTAGATCACTGCAGCTTCTAGGACCCGGTTTCTTTTACTGATTTAAAAACAAAACAAAAAAAAATAAAA40.10554089709762532No Hit
CGACGCGGGAAGGAATAAAAAAAATCCATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
GCTTATTAGAAGAATGAACTAAGGTGTCTACCATGATTATTTTTCTAAGCTGGTTGGTTAATAAACAGTAC40.10554089709762532No Hit
CGCTCTTCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
TCCTATTACCATTCTCTGCAATAAACTCAAATCACATGTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
GATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCTTGTGGTAATATGATGTGCCTT40.10554089709762532No Hit
GGTGTCCGAGTACCAGCAGTACCAGGATGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGG40.10554089709762532No Hit
GTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTACCATTCCAAAAAAAAAAAAA40.10554089709762532No Hit
GTACTGGTTGAACCTGACCACTTCAAGGTTGCAGTGAATGATGCTCACTTGTTGCAGTACAATCATCGGGT40.10554089709762532No Hit
CAGAAGTACTTCGCATCCAGAATGTTTTGTCTGAGAAGCCCAGGGTGAGCACCGTGTATGCCAACAATGGC40.10554089709762532No Hit
CCATTCATCATGAGGGAGTTTCTCAAACCAGGAGTTTATATTTATTTTTTAGAAAATACACACTTTTCAGG40.10554089709762532No Hit
GCAAGAGCTGGAGAGGGAGCTTTTTAAGCTCAAGCAAATGTTTGGTAATGCAGACATGAATACATTTCCCC40.10554089709762532No Hit
GCCATTTACAATTGACTCCGTTTCCTTTTGTAGGTTTCCCTGTCTGTCTGTGTTAGTAGAAAAATAAAATC40.10554089709762532No Hit
GCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGTGATGTTTTTTT40.10554089709762532No Hit
TGTCTACTGCTTGGATCCATACAAAACTATCGGTTCAAGTTGATGTGACAAGGGAAGGGAGCACCAGATGA40.10554089709762532No Hit
GATCAAGCGCCAGAATGGAGATGATCCCTTGCTGACTTACCGGTTCCCACCAAAGTTCACCCTGAAGGCTG40.10554089709762532No Hit
CATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGA40.10554089709762532No Hit
ACTTGAGTACCCAGTACCCAGAAGAGCTCCATCATCATGAAAAGAAAATGGTTGGCCCAGCGTGGTGGCTC40.10554089709762532No Hit
GCCTTGTGGCTACTCTGCAGTCACTGGGAGCAACTGGACTCTCCGGATTGACCAAGTTCATCCTGGGCTCC40.10554089709762532No Hit
TGATGTGGCTTTGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGA40.10554089709762532No Hit
GCTGTGATACGATGCTTCAAGAGAAAATGCGGTTATAAAAAATGGTTCAGAATTAAACTTTTAATTCATTC40.10554089709762532No Hit
GATGAGGGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10554089709762532No Hit
GGGATGTACATAAGTTATTTTTGCCCATGCCTAAACTAGTGCTATGTAATGGGGTTGTGGTTTTGTTTTTT40.10554089709762532No Hit

[OK]Adapter Content

Adapter graph