FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002878713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002878713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2510
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA47719.00398406374502No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG150.5976095617529881No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG150.5976095617529881No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC100.398406374501992No Hit
GCTCTCCCTGCCACATTGAGATGATCCTTACGGAAAAGGAACAGATTGTTCCTAAACCAGAAGAGGAGGTT90.35856573705179284No Hit
GGATAAAATAATGAGGACATTAGACAAACCAAACTAAGTGAATTTTAGCCTGGTAGCCTCTCTAAGGAAAC80.3187250996015936No Hit
GTGCCATGTGGTGGGGTGCTGTCTGGGGCATCTGTTTTTCATTTTGCCTGTGGTTTGTGTTGCAGGTGTTG80.3187250996015936No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.3187250996015936No Hit
TCTTACAGATCTATAAGGTCACATGCTTTTAAAATAGTAGCAAGTTAAACTTCACTCTTGAATTCTTTACA80.3187250996015936No Hit
AGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATCATCTCAACTTAGTATTATACCC80.3187250996015936No Hit
GTGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACCAAATAAGCTATA80.3187250996015936No Hit
CTCCCTGCCACATTGAGATGATCCTTACGGAAAAGGAACAGATTGTTCCTAAACCAGAAGAGGAGGTTGCC80.3187250996015936No Hit
ACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTTTAGGCGGAGGTTGCAGTGAGCTGAGATTGTGCC70.27888446215139445No Hit
TGAATGTTCATATGCAGCAGAATAAAACTGGACCCGTATCTCTAACCATATAAAAAATCAACTCAAGATGA70.27888446215139445No Hit
GATGGGCGGCGCGGGCGGCGAGGGCAGCGACGACGACACCTCGCTCACCTGAGCGCCGCACCGCTTCAGGG60.2390438247011952No Hit
GGCTGGCACAGTGAAACCCCATCTCTACTAAAAATGCAAAAATTGGCTGGGTGTGCTGGCGGGCGCCTGTA60.2390438247011952No Hit
TCCCTACACGACGCGGGATTCTAGTAAATAGATGAAAGTTATAAACCCTCAAAGAAAGAGCACAGGAAGGA60.2390438247011952No Hit
GAATCACATCCGGTTGTGTCCTGTGGGAGGGTCAGAGGCAGAATCTACTTACAGTGGTGTAATTAAAGTTA60.2390438247011952No Hit
GACATCTTTTAAGTACATTTTCAACAGTTTGAGGACTAAGCCTTTCTAAAATAACATTGTAATAAACCATT60.2390438247011952No Hit
GGCAGGAGAATCGCTTGAACCCGTGAGGTGGAGGTTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGCC60.2390438247011952No Hit
CTACACGACGCGGGGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGG50.199203187250996No Hit
CCCCATCTCTGCTAAAAATACAGAAATTAGCTGGGCATGGTGGCGGGCGCCTGTAATCCCAGCTACTCAAG50.199203187250996No Hit
GGTCTCATTGCTGCCCGCCGGACTGGACGTCTCCGGGGAACCAAGACTGTGCAGGAGAAAGAGAACTAGTG50.199203187250996No Hit
ATTTAGTTCTAACCACAAATAACAAGTAGTTTCCAAGGAAATTTCAGTGGCTCTCTGGTTTCTTAACAAAA50.199203187250996No Hit
TCTCAGAACTGTTTGTTTCAATTGGCCATTTAAGTTTAGTAGTAAAAGACTGGTTAATGATAACAATGCAT50.199203187250996No Hit
CCCATCTTCCAGAGAATTTGGATTCCCTAGTGAATCTTAAGGTTCTGACACTGATGGACAATCCCATGGAA50.199203187250996No Hit
GAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTCAGGAGGAAGCAGCACTAAAAGCACTCTGAGTCAAGA50.199203187250996No Hit
GTGTAAGGACTTTGGCTTACATTTGAATAATGTCTAGATTTTGAAAAATTACCTGTATAATGGAGAATTAA50.199203187250996No Hit
CTTATGCAGTACTGCTGTGGTTTCGCAGTGGCCAGAAAACGAATGTCACCTCCCCGGGTGCCTTATAATCG50.199203187250996No Hit
GGAAAAGTGAGAGGTCAGACTCCTAAGGTGGCCAAACAGGAGAAGAAGAAGAAGAAGACAGGTCGGGCTAA50.199203187250996No Hit
TTACCCTCCTGATCATGTGGCTGACTGGGTTCTGTTCCTCGCTGCCACTGCCCGGCATCCCAGGAGAATAC50.199203187250996No Hit
GCTGAAGACTGGCCTTATTAATGGACAGCTTTCCTAACAAGAGATTATTAACTTTTATCAGGTGTTAACAT50.199203187250996No Hit
GGATGGAGATGAAGATGAGGAAGCTGAGTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACG50.199203187250996No Hit
GTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTCAGGAGGAAGCAGCACTA50.199203187250996No Hit
CCGTGGGCTGTTACTTGCTTTGAGTTGGAAGCGGTTTGCATTTACGCCTGTAAATGTATTCATTCTTAATT50.199203187250996No Hit
AGTGAGTCCTTGGAATGGCATGAAAACATAGTAGGGAAGTTGTAGATAGGAAGAGGAAATTATGAAAACAT50.199203187250996No Hit
AAACTCACCTGAGTTGTAAAAAACTCCAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGA50.199203187250996No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA40.1593625498007968No Hit
GGCTGTCCTGCCACCCAGCCCCAGCCAGGGCTCAATCTCTGGGGGCTGAGGAGCAGCAGGAGGGGGGAGGG40.1593625498007968No Hit
CAGCAACAGTGGAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.1593625498007968No Hit
TCTTTGAAGAGATGACAACAAATTTTGGTTTTCTACTGTTATGTGAGAACATTAGGCCCCAGCAACACGTC40.1593625498007968No Hit
GGATTCATCTTTCTTTTCACCGTAGGTGGCCTGACTGGCATTGTATTAGCAAACTCATCACTAGACATCGT40.1593625498007968No Hit
CTATCCCCAGGGAAGGAAAGGCTCCGCCATTTGGGAAAGTGGTTTCTACGTCACTGGACACCGGTTCTGAG40.1593625498007968No Hit
GCCTTTAGTATTACCAATCTGCAAGCTTTTAAAGGTTATCAAGAAAGAACTATGGTCAATTATCCCTCAAA40.1593625498007968No Hit
GTATACTACCATAGTGAGCCATGATTTTCTAAAAAAAAAAATAAATGTTTTGGGGGTGTTCTGTTTTCTCC40.1593625498007968No Hit
GGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTT40.1593625498007968No Hit
TAGGAATACAGCTAACAAGGGAAGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATC40.1593625498007968No Hit
GAAGGAGACTGTATTCACCAAGTCTCCCTATCAGGAGTTCACTGACCACCTCGTCAAGACCCACACCAGAG40.1593625498007968No Hit
TTTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATTGACCGCTGGCT40.1593625498007968No Hit
GGCTGGGCGAGTATCTCTTCGAAAGGCTCACTCTCAAGCACGACTAAGAGCCTTCTGAGCCCAGCGACTTC40.1593625498007968No Hit
CTGTGCTCACGGTTGGACTTGGTGTCAGTGGGAAAGGGCAGTGTGGGGACTGTCATTTTTGTGATTTAATA40.1593625498007968No Hit
ACGCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.1593625498007968No Hit
ATTTTAAGGATTTTCTGTATAGATTACTCATGTCAGACCAAGAATTTAAATTATTTTGAGAGAGGCATTTA40.1593625498007968No Hit
ACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAA40.1593625498007968No Hit
CTAAAAATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.1593625498007968No Hit
CCCTACCCGAAAGCCCCTTTCCTTGGCTGGTGATGAAGAGACAGAGTGTCAGAGTAGCCCCAAGCACAGCT40.1593625498007968No Hit
ATCTGCGGGGCCATTCGTAGGATGGGTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGATGGCAT40.1593625498007968No Hit
GACTTAAATATTATTGCATGTAGGTAATGAATCTAGCATGGATAAGGCAAAGAAATCAATAACCAACAGTG40.1593625498007968No Hit
AAACAGCACGGCCACAGGCCCCAGCCACAGTGGGGCTGGCCTTCCGGGCAGATGACACCTTTGAGGCCCTG40.1593625498007968No Hit
GAATGCACCTTCTGAGGCACCTCCAGCTGCCCCCGGCCGGGGGATGCGAGGCTCGGAGCACCCTTGCCCGG40.1593625498007968No Hit
CTAAAGGCAGAAGCAGAAGTAGCTGCTTTTTAGCAATAGAATTGTTTCAGTATTTTGCTGCTGTTTAATGC40.1593625498007968No Hit
GAGGACCAGTGCTTTGATTTTTATTATGCTATGTTATAACTGAACCCAAATAAATACAAGTTCAAATTTAT40.1593625498007968No Hit
CTCTGATGCAGATGACTCTGACAGTGATGCTGTATCAGACAAGTCAGGCAAAAGAGAGAAGACCATAGCAT30.1195219123505976No Hit
GCTCATGGAGCTTCATGGTGAAGGCAGTAGTTCTGGAAAAGCCACTGGGGACGAGACAGGTGCTAAAGTTG30.1195219123505976No Hit
GAATATAAATTTGTTTTCTCAAATATTTGCTATGAAGGGTTGATGGATTAATTAAATAAGTCAATTCCTGG30.1195219123505976No Hit
GAATTATCTATTTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
CCTGTATTCCCAGCTACTCAGGAGGCTGTGACAGGAGAATCACCTGAACCCGAGAGGCAGAGGTTGCAGTG30.1195219123505976No Hit
GCTTAAGGGAGCTGATGGAGCTGAAAGCCAAGGCTCGAGAACTGCATGAAGAATGTAGAAGCCTCAGGAGC30.1195219123505976No Hit
GCCGCAAGTGCTATGCTCGCCTTCACCCTCGTGCTGTCAACTGCCGCAAGAAGAAGTGTGGTCACACCAAC30.1195219123505976No Hit
CTAGAATTGGATTATGGTGTAAAAATAAAAAAAAAATTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
GGTATTATTTTGTCTAGAATCTGAACTATTCTAATAAAATTGAAAATAAAGCCTTTCTCCCACTCTTTTTG30.1195219123505976No Hit
CAGATGATAGTGACGAATGTCTGGCAGTGAGGACACATTTTGGCATTCTTGCTGACTCTGACAGAGTGATT30.1195219123505976No Hit
GAAGGATGTTCAACTGCAGCAGAAAGATGAAGCTCTACAGGAAGAGAGAAAAGCTGCTGATAACAAAATTA30.1195219123505976No Hit
GGGTAGTCGGACTTGGGATTGGAGAGAAACAGGAACTGAGCATTCTCCTGGTGTGCAGCCTGCAGATGTGA30.1195219123505976No Hit
ATGCTAATCTGTATGTTGACACCTTGTAATTAAAATACGTACCATAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
TTGTATTTTCAAACAAATAGAAAATAAACTTATTAGGAAGCATTTTAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
GAAGTTATCAGTACCAGCAGCAAGGCAGAACCACCCCAGTGCACCTCCCTGGCCTGGTCTGCTGATGGCCA30.1195219123505976No Hit
GGGGCATCTGTTGGCTGAACTCAACCTGAAGCCAAAGAGAAGATGAGTGGAGAGAGGCAACATTTATAGAG30.1195219123505976No Hit
ACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT30.1195219123505976No Hit
GACTCTCAAGATTTATGAAGGTGCCTACCATGTTCTCCACAAGGAGCTTCCTGAAGTCACCAACTCCGTCT30.1195219123505976No Hit
GCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACCTGGAAGGCAGAGGTTACATTGAGCTGAGATCGT30.1195219123505976No Hit
GAAGACTGGAAAGGGGCAAATATAATACTTTTAATAAAGTAGATTTATTTTTGCAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
GTGTATGGAGAGATTCAAGAAATAATTTTAAAACCGCATACATAATAAAAGACATTGTTGCATGGCTTATA30.1195219123505976No Hit
CAGCCTGGGCAACATGGTGAAACCCCGTCTCTACTAAAACACAAAAAAAGTAGCCGGGCGTGGCAGCATGC30.1195219123505976No Hit
TGTTAATTCCTTAAGTCTAAAGATGATGAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
GTCCAGGGATGAGGGTTTGGGGACATAGATGGAGCCAGGTAGGGCCTGGAGCAGTAGCTCATGCTTGTAAT30.1195219123505976No Hit
GAATTAACTTTCCTGATAACCATTGCATAATTACATTTTTCTATAAAATGAAAGATTATTACAACAAAAAA30.1195219123505976No Hit
GCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTT30.1195219123505976No Hit
GTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
CTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
CAAGCCCGGTTTATACAGAAGCAGATGGAACATTTTCAAGGAGTAAGTCCATGAGTGATGTCAGCGCAGAA30.1195219123505976No Hit
TCAAATAAAGTTATAAAATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
GGGAACAGGAGACCCACCTGAGGCTCAGCCCTAGCCCTCAGCCCACCTGGGGAGTTTACTACCTGGGGACC30.1195219123505976No Hit
GACATGGTACGTTCTTCAGATGTGTCATGGTCTGATACTCGTAGGACCCTCCGAAAAGATCACCGCTGGGA30.1195219123505976No Hit
AGCCTGACCAACATGCAGAAACCCCATCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGTGCATGCC30.1195219123505976No Hit
GAGCTGGCCCTGGTACTCACAGGACCACAGGCCTGGTAAATACTATGTAATTAAATGGGTCTCCTTGGAAG30.1195219123505976No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC30.1195219123505976No Hit
GGGTAGCTGAGTCTGCTTAGGGGACTGCATGGGAAGCACGGAATATAGGGTTAGATGTGTGTTATCTGTAA30.1195219123505976No Hit
GCACAGAGCTCAAGTAATTTACACCAGAAATACCAAGGGTGGAGATGCTCCAGCTGCTGGTGAAGATGCAT30.1195219123505976No Hit
TCCCTACACGACGCGGGGAGGCATGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATC30.1195219123505976No Hit
AAAGAAAGATGTGACCAACTGCAAGCAGAACAAAAGGGTCTTACTGAAGTAACACAAAGCTTAAAAATGGA30.1195219123505976No Hit
GATTTACATCATTATTCGTATTTTTCAAATTTCTGGACATTTGATTCCAAACTAAAATAAAATTTATGTTG30.1195219123505976No Hit
CCTCTACTCTTTGAGACATCACTGGCCTATAATAAATGGGTTAATTTATGTAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
ATCCCACTAATTGTCCATATCTGTTCCAAAGCCAAATCAAGAGGAACAAGAGCAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
TCCCTACACGACGCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
CACCAGAACTCAGCCTTGACTTATTTCTCAAGGTCACTGAGAGTGTTGTCAAAAGGTGGTCTCAGGCCAGG30.1195219123505976No Hit
GAGTTAATACTTACAAAAGGATAAAAATAAACTCCTGCTTCCCAAGGAAAAAAAAAAAAAAAAAAAAAAAA30.1195219123505976No Hit
ACACACTGATTAGGTTATGGTTTAATGTTACAACAACTATTTTTTAAGAAAAACAAGTTTTAGAAATTTGG30.1195219123505976No Hit
GCCTGCATCCTGACGCGGTGCCGTCCCCAGCACGGTGATTAGTCCCAGAGCTCGGCTGCCACCTCCACCGG30.1195219123505976No Hit
CATGCATTGTTGAGGTGGTCTGAATGTTCTGACATTAACAGTTTTCCATGAAAACGTTTTATTGTGTTTTT30.1195219123505976No Hit
ATGGAACTCAGGGCCGAATACCTCAGGGAGAAGCTGCAGCGGGACCTGGCGGCGGAGCATGTGGCGGTGGA30.1195219123505976No Hit
CTTTGACAGATAACGCTTTGATTGCTCGATCTCTTGGTAAATACGGCATCATCTGCATGGAGGATTTGATT30.1195219123505976No Hit

[OK]Adapter Content

Adapter graph