FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002879017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3819
Sequences flagged as poor quality0
Sequence length71
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1554.058654097931395No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG802.0947892118355593No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA290.7593610892903901No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG290.7593610892903901No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT280.7331762241424457No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC240.6284367635506678No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA190.4975124378109453No Hit
GGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACC110.2880335166273894No Hit
GGTGTGATCTGAAAAGGCGTCTTCACTGCTTTATCTCATGATGCTTGCTTGTAAAACTTGATTTTAGTTTT90.2356637863315004No Hit
GAATAGGGGCTGAAGGATCTATATTCCCTTATTGCATTTTCCTTATGTATAATTTTCCAGATGGTGATGTT90.2356637863315004No Hit
GTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTTTAAATGACAGAAGCGTATATGAATTCAA90.2356637863315004No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTTTTGGC80.20947892118355593No Hit
ACATCTTGGTCAGATTTGAACTCTTCAATCTCTTGCACTCAAAGCTTGTTAAGATAGTTAAGCGTGCATAA80.20947892118355593No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACACTATAG80.20947892118355593No Hit
GGGTTCAATCCCTTCAGCTCAGGCGGACCATTTAGATTTAAATTCCACTTCAATTAAACCAACTGTTTTTC80.20947892118355593No Hit
GTCCTGAAAAAAGAAAAACATTTTACTCTGTGTACCTTGTGTCTTTCTAAATTTCTCTCTCCAAAATAAAG70.1832940560356114No Hit
GGCACCAAAGTAGTTCTAGATGACAAGGATTATTTCCTATTTAGAGATGGTGACATTCTTGGAAAGTACGT70.1832940560356114No Hit
GGACCTGATGGCTTTACTGCTGATCTTACCTAACATTTAAAGAAGGACTAATACTCATCCTTCTCAAACTC70.1832940560356114No Hit
ACTATGTGTCAAAGGGTTTGGAGAACATTGATTAAGGAAGCATTTTCCTGATTGATGAAAAAAATAACTCA70.1832940560356114No Hit
AGGCAGGAGGCTACAGGCAGGAGGATCACTTGAGCCCAGGAGTTCAAGGCTGCAGTGCGCTATGATCACAT70.1832940560356114No Hit
GCACTAAAAGCACTCTGAGTCAAGATGAGTGGGAAACCATCTCAATAAACACATTTTGGATAAAAAAAAAA70.1832940560356114No Hit
CAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAAT70.1832940560356114No Hit
GGGCAGGATTCTGCAGCTGCTTTTTGCATTTCTCTTCCTAAATTTCATTGTGTTGATTTCTTTCCTTCCCA70.1832940560356114No Hit
GTGGGTGTCACCCTCCTTCCTCCCCCAACACACCCTTCAGGGGTAAGAGGAGAAGTAATGTAGAAAAATTA70.1832940560356114No Hit
TACCAGAAACCACAACATTGACAGTTGGTGGAGGGGTGTTTGCACTTGTGACAGCAGTATGCTGTCTTGCC70.1832940560356114No Hit
ACTTCATGGATGTGAAATGCCCAGGATGCTATAAAATCACCACGGTCTTTAGCCATGCACAAACGGTAGTT70.1832940560356114No Hit
GACCCAAATGTAAATATTAAAAATAAATATTTGCAATTTTCTACAGAATTGAATACCTGTTAAAGAAAAAT60.15710919088766695No Hit
AGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGACTGTGAATTTTGGTGATG60.15710919088766695No Hit
CCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTCAGATT60.15710919088766695No Hit
GGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCACC60.15710919088766695No Hit
ATAAACTGGTGACAACTTTCAAAAACATCAAGTCTGTGACCGAACTCAACGGCGACATAATCACCAATACC60.15710919088766695No Hit
GTTACTGTCCTGGGAAAATCATTTTTATAGAGATGGCCTTCCAAGTGGTTTTAAAATTTACTGAAGTTTTT60.15710919088766695No Hit
CATTTATTTTGACTGTGATTTATTTGGAGTGGAGGCATTGTTTTTAAGAAAAACATGTCATGTAGGTTGTC60.15710919088766695No Hit
ATCCGGATATAAAACTTCAAAAATTACCATTTTATGATTTACTGGATGAACTGATAAAACCCACCAGTCTA60.15710919088766695No Hit
GAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGCTGTTAATTCTTCAGTCATGGCATTCGCAGTGC60.15710919088766695No Hit
CTCAGGGCCCTATCCTCACAGCAAGTGGCAAAAACCCTGTAATGGAGCTCAATGAAAAAAGAAGAGGTCTC60.15710919088766695No Hit
GTTATTTGAGGATGAATAAAAACAAAAAACAATAGGAGTCTATGGAATACCTATATAATAAAGGAATGGGA60.15710919088766695No Hit
GAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGTGGAGATGGTACCACTGCACTCCAGCCTGGGC60.15710919088766695No Hit
CTCTGGAACCCAGCAGGATCACAGCTGCCTGTGCACGTCTTCCCTTCTCTCCCTGCTGCGGCACTTATGGA50.13092432573972246No Hit
ACAGAAGCATCATCTTCATCTCAGGATAAAGACAAAGATAGCCGTTGTACCCGGCAGCACTGTACAGAAGA50.13092432573972246No Hit
GCTACATTTGAAGCCTGTACAAAAGCTTATCCCTGTAACACATGTGCCATAATATACAAACTTCTACTTTC50.13092432573972246No Hit
CATCAAGGGAATGGGTACTGTTCAAAAAGGAATGCCCCACAAGTGTTACCATGGCAAAACTGGAAGAGTCT50.13092432573972246No Hit
GTGAAGCTTATCAAGAAGATGGGTGACCACCTGACCAACCTCCACAGGCTGGGTGGCCCGGAGGCTGGGCT50.13092432573972246No Hit
GTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGG50.13092432573972246No Hit
CCAAGGCAGTGCATGCATGTTGGGGTTTCCTTTACCTTTTCTATAAGTTGTACCAAAACATCCACTTAAGT50.13092432573972246No Hit
ATGATTCTTACAGTTGGTGGAACAGCATATGCCATATATGAGCTGGCTGTGGCTTCATTTCCCAAGAAGCA50.13092432573972246No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACGCTATAG50.13092432573972246No Hit
ATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACAC50.13092432573972246No Hit
GTTGTCTTGAACAGCCTGACTCCTGCCAGCCCTATGGAAGTTCCTTTTATGCATTGGAGGAAAAACATGTT50.13092432573972246No Hit
ATTTTTAAATATTTAAATATTAATATTAATTTTTTTAAAAATAAAATATTTTGTGTCAAAATGCTCTAAAT50.13092432573972246No Hit
CTTTTATCTTATTTTGCTCAATAAAATTGTTCAGAAGATCAAAGTGGTAAAGACAATGTAAAATTTAACAT50.13092432573972246No Hit
GTTACCTATGTACCTGTTACCACTTTCAAAAATCTACAGACAGTCAATGTGGATGAGAACTAATCGCTGAT50.13092432573972246No Hit
CTCTGGAGAAGATTGACCTTAAGTTCATTGACACCACCTCCAAGTTTGGCCATGGCCGCTTCCAGACCATG50.13092432573972246No Hit
GCTCCACTGTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTCAGGAGGAAG50.13092432573972246No Hit
ATGTTTAAGAATAATATTAACAAAATAAAGGAGTTTAATGCAGTGATCTTTGTTTTTGGCACATCAAAAAT50.13092432573972246No Hit
GGAAAGTCCAAGCCGTAGGACCCAGTTTCCTTTCTTAGCTGATGTCTTTGGCCAGAACACCGTGGGCTGTT50.13092432573972246No Hit
GCTTCCTAGATAGAAACCAAAGCAGTGCAAGATTCAGTTCAAGGTCCTGAAAAAAGAAAAACATTTTACTC50.13092432573972246No Hit
GGACTTAAGACAAATGGGACTGATGTCATCTTGAGCTCTTCATTTATTTTGACTGTGATTTATTTGGAGTG50.13092432573972246No Hit
GAACTGCTTTCCTATGTTTACCCAGGGGACCTCCTTTCAGATGAACTGGGAAGAGATGAAATGTTTTTTCA50.13092432573972246No Hit
GAACCTTACTATGATAATCTACTTGGAATGTGGATAAATGTAAAAAGAAGAAAAGTTAGAAGAGCAATATG50.13092432573972246No Hit
TGTCTCTGGTTCTATAGTGCAAATGCTTTTATTAGCCAATAGGAATTTTAAAATAACATGGAACTTACACA50.13092432573972246No Hit
CCAGTGACTTCAACTTTGGCATTTCATTCATACTTCTGTAGAGAACGGAAAACTATTGTCCATTAACATGA40.10473946059177797No Hit
GCAAATAAAAAGCAGATTGATCCATAACAACCATTTCCATCCTGGAATGGTTACAATTCTAAAATACACTT40.10473946059177797No Hit
CGTGGCATATCAATATGTGAAAAAGGGGTCTCGAATTTATTTGGAAGGGAAAATAGACTATGGTGAATACA40.10473946059177797No Hit
AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCCAAAAAAAAAAAAAAAAA40.10473946059177797No Hit
GAACCACACAGAATGAAAACACGAAAAAGAAACCGTTTGTATTCAAATCTTGGCCAATATCCAACTAGCAA40.10473946059177797No Hit
GTGTTTACGTAGACCAGAACCAATTTAGAAGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAA40.10473946059177797No Hit
ACCTGTGACATTCTGGACTATTTCTGTGTTTATTTGTGGCCGAGTGTAACAACCATATAATAAATCACCTC40.10473946059177797No Hit
GTCTTCAGAGATCCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGAGATACAA40.10473946059177797No Hit
GTTCCTTTATAGTTTTGTTCAGAAAAACATATGGAGACGTTTATACCCATTGATTTGACAACTGAAAATCA40.10473946059177797No Hit
AGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCA40.10473946059177797No Hit
CCTGAAGTTAGAAAGGCTCAACGAGAACAAGCTATCAGGGCTGCTAAGGAAGCAAAAAAGGCTAAGCAAGC40.10473946059177797No Hit
CTATGTAGTTGAGAGCAACATGTATTTTGTTATTTTTAGAATGGTCAGTATATTGCTATAAAATTTTAAAT40.10473946059177797No Hit
GAAGATAAGGCTTTCAAGCAGAAACAAAAAGAGGAGCAGAAGAAACTCGAGGAGCTAAAAGCGAAGGCCGC40.10473946059177797No Hit
GCACCATGTCTGGCAGAAAGGGGACTGATGATTCCATGACCCTGCAGTCGCAGAAGTTCCAGATAGGAGAT40.10473946059177797No Hit
CCTGACCTCAAGTGATTTGCCTGCCTTGGCCTCCCAAAGCGTTGGGATTATAGGTGTGAGCCACCAGCCCT40.10473946059177797No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACACTATAA40.10473946059177797No Hit
ACCTTTAAATTCTGTAGCACACTGAGGAAAAACTACATACTTGGACATCTGTAAATCTTTGTACAGAAACT40.10473946059177797No Hit
GCTGTTGTAGCATCCAGTTCATCTTAAGAATGTCAACGATTAGTCATGCAATAAATGTTCTGGTTTTAAAA40.10473946059177797No Hit
GCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGA40.10473946059177797No Hit
CATTAACAACATAAAACCCTCATTCACACGAGAAAACACCCTCATGTTCATACACCTATCCCCCATTCTCC40.10473946059177797No Hit
AGCTTCTCTCAGATTTCCAAGAGCCAGAGATGAATTGTGCTGCATCTTGCCCCAATTCTTAGGATTTCTTT40.10473946059177797No Hit
GCTTTTTGTACTTGGAAGTGTTTCAAAAAATTATATGACCATATTTACTCTTTCTAACTTTCTTTACTCCA40.10473946059177797No Hit
GCCCGAGAGGCTGGGAGGTTTGTTGAGGGTGTGGGGTGTGCCCCACCTGAAGCCGGGGCTCCCCCTGCCTG40.10473946059177797No Hit
GGTCCTAGCCAATGGTCTGGACAACAAGCTCCGTGAAGACCTGGAGCGACTGAAGAAGATTCGGGCCCATA40.10473946059177797No Hit
GTGTAACCATTAGTGCAACTACTACCTTGGTGCCTCAGTTTACCCATCTGTAAAATGGGTAAGCATAGCCA40.10473946059177797No Hit
GGTTTTGTTCTTTGTGAACATGGGTATTTTGAGGGGAGGGTGGAGGGAGTAGGGAAGTGGTCCTTTTACAA40.10473946059177797No Hit
GTGTTTTGTCAGGGGGTTGAGAATGAGTGTGAGGCGTATTATACCATAGCCGCCTAGTTTTAAGAGTACTG40.10473946059177797No Hit
GTATCTAAAGGGTGGGGTAGCTGATGCCCTCCTGTATAGAGCCACCATGATTCTTACAGTTGGTGGAACAG40.10473946059177797No Hit
TTTATGAGGAGTTCTCTTATGATGCTGTTAGTCAGCTCAGACTGCTGTAACAAAATACCGCATACTAGATG40.10473946059177797No Hit
GTATTTCACAAAAATATCTTTTGAAATTGGCTTTGGAGTTTACATATACTGAACATGAAAGTTTATAATAA40.10473946059177797No Hit
GAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTGCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10473946059177797No Hit
ATCTGCTTATGGCACAATTTGCCTCAAAATCCATTCCAAGTTGTATATTTGTTTTCCAATAAAAAAATTAC40.10473946059177797No Hit
GTTCAAATTCAGCATGGCTGCAGCTGATTAAGAAATTGATATGATTATTCTTTGCTAGCCTCTCTTACTAA40.10473946059177797No Hit
CATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAA40.10473946059177797No Hit
GGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCT40.10473946059177797No Hit
GAGCATTCGTGCTAAGATAACAGACTCCAGCTCCTGGTCCACCCGGCATGTCAGTCAGCACTCTGGCCTTC40.10473946059177797No Hit
CGGGAGCCCAGGAGCTTGAGGCTGCCAGTGAGCCATGATGGCACCACTGCACTCCAGCCCGGGCAACAGAA40.10473946059177797No Hit
GACAAGTAATTGTCTAAGTGTTTTTCTTCGTGGTCCCCTTCTTCTCCCCACCTTATTCCATTCTTAACTCT40.10473946059177797No Hit
CTTCGTACACCTGCGAGTGTTCCAATCTCTCCCTCATGAAAACAAGCCCTTGACCTTATCTAACTACCAGA40.10473946059177797No Hit
GCTTTTTGATGACTTCTAGCAAGCCTCGCTAACCTCGCCTTACCCCCCACTATTAACCTACTGGGAGAACT40.10473946059177797No Hit
GGAATGGTGGCTTATCCCTGTAATTCCAGCACTTTGGGAGGCCAAGGTGGGATGATTGCTTGAGCCCAAAA40.10473946059177797No Hit
AATTTGCTTCTAAAAATCAGGTATAAAGTTCAGATGAGATTCCCACTTTATAAATTCTGACATTTAAGCAG40.10473946059177797No Hit
GTAAAAACAAATGGTGTATTGCTTTTCATACAAGTGTTTTCACAAAAGCCATTTGCCTAGGCAGCAAAAAA40.10473946059177797No Hit
GTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATCATCTCAACT40.10473946059177797No Hit
GCACAAACGGCGGCGTATTGCTCTGAAGAAGCAGCGTACCAAGAAAAATAAAGAAGAGGCTGCAGAATATG40.10473946059177797No Hit
GGATCCAGTGTATAAATCCAATATCATGTCTTGTGCATAATTCTTCCAAAGGATCTTATTTTGTGAACTAT40.10473946059177797No Hit

[OK]Adapter Content

Adapter graph