FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002879334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1138
Sequences flagged as poor quality0
Sequence length66
%GC22

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA38633.91915641476274No Hit
CTTTTTTCTCTTTCCCTTTTTATTTCTTTCAGTAAAAATGGTAGCAAGAAGAGAAGAAAATGGGCA70.6151142355008787No Hit
GTGTGTTGGCTGCTCCACTGTCCTCTGCCAGCCTACAGGAGGAAGAGCAAGGCTTACAGAAGGATG70.6151142355008787No Hit
CTACCAACCTTCGTTACATTTGGTACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.5272407732864675No Hit
TATCTGGAGATTTCGACGTGTTTTCCTCTCTGAATCTGTTATGAACACGTTGGTTGGCTGGATTCA50.4393673110720563No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.35149384885764495No Hit
CAGGTGGCAGCTGCCAACAAGAAGCATTAGAACAAACCATGCTGGGTTAATAAATTGCCTCATTCG40.35149384885764495No Hit
ATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCTGTTTAAAATAGAAAGAAAAAAAGAAATGGT40.35149384885764495No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.35149384885764495No Hit
AGATAAAAGTCTTTATATGAATATATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.26362038664323373No Hit
GTACAAGCAATAAAGACACTCATTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.26362038664323373No Hit
GTACAAAGTACTCAGTGTTCCTGAAAGTACACCTTTCACAGCAGTCTTAAAGTTTGCAGCAGAAGA30.26362038664323373No Hit
GCCACCTTCAATGCCTGCCACCCTGCCCGAGGATGTACAGAGCCGTGCCCACACATTTCCTTGCAA30.26362038664323373No Hit
CCTGAAGCGCAGCCCCTGTGAATAACAGGTGGCTTTTCATGGATGTCTCTAGTCAGAGAAAAATGA30.26362038664323373No Hit
ATATTAGTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.26362038664323373No Hit
CATTCTTATATTTTGCCAGATCTGTTACGTAGCTGAGTTAATTTCATCTCTACTTTTTTAATATAT30.26362038664323373No Hit
GTTAGAATACCTTTTGTTGTTGAAGATGTGAATGAAGTATGCATGTGCATTGACTGTTGAATTCAC30.26362038664323373No Hit
CCGTGGGTGTGTCCAAGAAGAAATAAGTCTGTAGGCCTTGTCTGTTAATAAATAGTTTATATACAA30.26362038664323373No Hit
CAAAGAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAATGTGTTCGTGACAGGATCA20.17574692442882248No Hit
GTATTTATAGTAACCATTTTCCTTTGGACTGTTCAAGCAAAAAAGGTAACTAACTGCTTCATCTCC20.17574692442882248No Hit
CCCCTCCAAATCGGGCACCACCTCCTTCAGGGCGCATGAGACCATATTAAATTCTATTTACTATTT20.17574692442882248No Hit
CCGATCTACCAACCTTCTTTTAATTTTAGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAA20.17574692442882248No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC20.17574692442882248No Hit
TTCCCTACACGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
GTTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
CCTTCGATTAACTACCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.17574692442882248No Hit
CAATAAGATGTATGAACGGAGCAGAAATAAATACTTTTTCTAATTAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
CCTTAATAAAGGCCCCCACTTCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
AACTCAGGAGGAGGAGGATGTGGTGAGCCAAGATCACACCACTGCACCCCAGACTGGGCAACAAGA20.17574692442882248No Hit
CCTCAGGTAGCCTCTCTCCCCCTGGGCCACTCCCGGGGGTGAGGGGGTTACCCCTTCCCAGTGTTT20.17574692442882248No Hit
GGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
CCTCTGCCAGCAGGAATAAAGACTTGTGCATCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
GTCCAAGAAGAAATAAGTCTGTAGGCCTTGTCTGTTAATAAATAGTTTATATACAAATAAAAAAAA20.17574692442882248No Hit
CCTTGTTCATGTGTGGGTCTGTCTTCCTTATGCCAATCAGCAGTATATACATCACCTCTCACCCTC20.17574692442882248No Hit
CTTTGGTTACCTATGTACCTGTTACCACTTTCAAAAATCTACAGACAGTCAATGTGGATGAGAACT20.17574692442882248No Hit
TCGCAAGAGCGTTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
TATGATATGTCTCCATACCCATTACAATCTCCAACATTCCCCCTCAAACCTAAAAAAAAAAAAAAA20.17574692442882248No Hit
ATCTAAGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
ACGCGGGCTCATCGTGGGTCTCCTAACCTACTGGTTCCTCTTCAGAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
GGCGCACTCCTGTAGTCCCAGCTACTTGGGATGGTGAGGCAGGAGAATTGCTTGAACCCGAGAGGT20.17574692442882248No Hit
GCTTAAAGGGCAAGGTTAGGAGTCCCAGATTTGGGAGGCCTGGACCAGGTATCAAGAGGTCTTTGG20.17574692442882248No Hit
GTTAACAGTCTCATTACAGATTTAGTTTACCAATCAACAGCATGTCTACTGCTTGGATCCATACAA20.17574692442882248No Hit
CCTTCGGTATTGGGTTTCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAA20.17574692442882248No Hit
GCATTGCTTTGACTTCCCTCTCCTTGGTTAATAAACACAAATGCTTGTTTCTCAAAAAAAAAAAAA20.17574692442882248No Hit
GGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTGGAAGGCTGAGGCAGGAGAATGGCATGAACCT20.17574692442882248No Hit
AAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
GAAATACTTCATTTTGATTGAGAAAATAAAATCAGATTTTTTCAAAGTCAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
CCTCCAAGCCCTGGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGCGGCCGCAAACTGACACC20.17574692442882248No Hit
GGGTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17574692442882248No Hit
CTTTGAGAGGCTGAGGCGGGCTGATCACGAGGTCAAGAGATTGAGACCATCCTGGCCAACATGGTG20.17574692442882248No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)