FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002879511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences222794
Sequences flagged as poor quality0
Sequence length71
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17060.7657297772830507No Hit
GTCATGGGTATTAACCACAGATTCTGCTGCCTCTGAGGGATGAGAACAGAGAGAAATATATTCATAATTTA5040.22621794123719668No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG3400.15260734131080728No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)