FastQCFastQC Report
Sat 3 Sep 2022
EGAF00002879518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences750748
Sequences flagged as poor quality0
Sequence length71
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62410.831304245898757No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG19200.25574493704944934No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17500.23310085408152934No Hit
GTCATGGGTATTAACCACAGATTCTGCTGCCTCTGAGGGATGAGAACAGAGAGAAATATATTCATAATTTA8940.11908123631364986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)