FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002879587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24502
Sequences flagged as poor quality0
Sequence length71
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA460.18773977634478817No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG350.14284548200146926No Hit
GTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAAT340.138764182515713No Hit
ATGTAAATATGATGCTGGCTTCAAAAAAAGAATCTTTTTATATGGTGGGACACTACACTCAGAAATTTGCT270.11019508611541916No Hit
GAATAAGAAAGTCTAGTACTTATCTAACTGGAGTCCAGTACTGATGAACATGTGAAGCCGTAATGCATAAA260.10611378662966288No Hit
ATGTGTAACTTTGAGTTTTTAGGAAGATAATTCTAGTGGCAAAGTTGAGGATAAAGGCAAAAGGGAAACCA250.10203248714390663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)