FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002879742

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879742
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2040
Sequences flagged as poor quality0
Sequence length71
%GC33

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA24512.009803921568627No Hit
ACCTTAGAGACCTAAGGTGAGAGACTTGACACATGGAAGGAGTAACATTAGGGTCTACCTCTACCTCAATT140.6862745098039216No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG140.6862745098039216No Hit
ATCTTTAAATCTGACAGTGAAGTGGCTGGTTACATCCGGCAAGTGGGTGACTTCCATCAGGTAATTATTCG110.5392156862745098No Hit
GATCAGCTGGTCTGGATGGCCATTGGACACCAAGGTGACCACTGGAAGGAAGGGCGTGTCTTGCTCCACAA100.49019607843137253No Hit
GCTGTGGCAGAGTTACAGTTCTGTGGTTTCATGTTAGTTACCTTATAGTTACTGTGTAATTAGTGCCACTT100.49019607843137253No Hit
CTTTAAATCTGACAGTGAAGTGGCTGGTTACATCCGGCAAGTGGGTGACTTCCATCAGGTAATTATTCGAG90.4411764705882353No Hit
CTACTGAAGATACAAAAATTAGCCAGGAGTGGTGGTGGGTGCTTGTAATCCCAGCTACTTGGGAGGCTGAG90.4411764705882353No Hit
GCTTTACCCTTCCCTGCGGGCTCTCTCCCCGACACATTTGTTAAAATCAAACCTGAATAAAACTACAAGTT80.39215686274509803No Hit
GACCCACAGAAGGTGTTCAAACACAACCTACTCTGCAAACCTTGGTAAAGGAACCAGTCAGCTGGCCAGAT80.39215686274509803No Hit
ATTTTACCCTATGACCAGCCTCTGAGAGCTTTTGACATGATTAATCGATTCATTTATGGAAAAGGATGGGA80.39215686274509803No Hit
GCTTTATGTTCGCTGTCCATGAAACCTTCTGTAACCACAGTGACTACAAGTAGTTCTTTCTCTATTGAATT80.39215686274509803No Hit
GTGTTGGCTGCTCCACTGTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTC80.39215686274509803No Hit
GAGGATCAGACTATCTGAATATAAACACAATCTGATGTTAATTTATTCTAAGAACACCATCATTTTGATTG70.3431372549019608No Hit
GAATTTGTAAGATGAATACTTTTTTTTAATGTGCATTATTAAAAATATTGAGTGAAGCTAATTGTCAACTT70.3431372549019608No Hit
AAATTAGTTAGGGAGCAGTTGTACCTACTGCCAAATGGTTCACTCCTGAGTTTATTGTACAGTTACTCCCA70.3431372549019608No Hit
GGTTTGAGTGTGTCAGCAACACAAGAGACTGTTGACATTTACTTGTGTGTTCTTAAACTTATCAGTCTAGG70.3431372549019608No Hit
TTACAAATTCATGTCGAATAGCTTGCCTCCCCTAGTCCAGTGAGTCCCTTGCATGTAACATCCTCAATGCC70.3431372549019608No Hit
GGACTGATTTCTAAAAGCTCTTTGTGTATTAGTTTTATTAACTCTTCATTAGAAATTTAGAAATACTTCTG70.3431372549019608No Hit
GAGAAGAAACCTACTACAGAGGAGAAGAAGCCTGCTGCATAAACTCTTAAATTTGATTATTCCATAAAGGT70.3431372549019608No Hit
GTGCCTTGGTGTTTCAAGCCCCTGCAGGAAGCAGAATGCACCTTCTGAGGCACCTCCAGCTGCCCCCGGCC70.3431372549019608No Hit
CCTTCTGAGGCACCTCCAGCTGCCCCCGGCCGGGGGATGCGAGGCTCGGAGCACCCTTGTCCGGCTGTGAT70.3431372549019608No Hit
GACAGGGTCTCGCTGTGTTGTCCAGGCTGAAGTGTAGTGGCACAGTCTCAGCTCACTGCAGCCTTGTCCTC60.29411764705882354No Hit
ATTCTGGAGACTGGAGAAGTAATTCCACCAATGAAAGAATTTCCTGATCAACATCATTAAAGATTATGTAA60.29411764705882354No Hit
GAATATGCCTTGCAAGTAATAATTAAACTTTATGCTCCATCCTGGCTAACACGGTGAAACCCCGTCTCTAC60.29411764705882354No Hit
ATACCTGCCACCCCACTCTTAATCAGTGGTGGAAGAACGGTCTCAGAACTGTTTGTTTCAATTGGCCATTT60.29411764705882354No Hit
GGTTTTCATTGCTGAAAAGAAAATCGTAAAAACAGAAAATGTCATAGGAATAAAAAAATTATCTTTTCATA60.29411764705882354No Hit
AAATAAAGATGCTTTTATTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.29411764705882354No Hit
AATCAGTTACGAGCTGAACTAGAGAAACATGGTTATAAGATGGAGACTTCATAGCATCCAGAAGAAGTGTT60.29411764705882354No Hit
GCCTGGCCAACATAGCAAAACCTCGTCTTTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCACACGCC60.29411764705882354No Hit
CATCCGGCAAGTGGGTGACTTCCATCAGGTAATTATTCGAGGTGGAGGACATATTTTACCCTATGACCAGC60.29411764705882354No Hit
GTGGAGGACATATTTTACCCTATGACCAGCCTCTGAGAGCTTTTGACATGATTAATCGATTCATTTATGGA60.29411764705882354No Hit
TGCGTGGGCAGAGGAATGTGGGCTATGTAGTCATAATAAATTAGGACACAGAGAAAAAAAAAAAAAAAAAA50.24509803921568626No Hit
GCCACATGTGTGACCTCTCTGACTTCTCTTCCTCCACCAAGGCAGCTTTCCTTACCCTGACACAGCCCCAG50.24509803921568626No Hit
GTTTTAATAGATGACATTAACATTTTTTGATAAATTTTATAATTAACCAAAAGGAGAGAGACCTCTTAGCA50.24509803921568626No Hit
TCCCAGCAATCGCTTGGTTCAGTTTCATTCAGCTCTCTATGGACCAGTAATCTGATAAATAACCGAGCTCT50.24509803921568626No Hit
GGATGTGGTGGCATGCACCTGTAGTCCTAGCTACTCAGGAGGCTAATGTGGGAGGATTGCTTGAGCCTGGG50.24509803921568626No Hit
GTGTAAAGTTGGTCATGAGGAGTGGAAATAATAGCATGTAGTGCCTATAACAGTACTTGCTATATGTTTTG50.24509803921568626No Hit
GTTTCAATTGGCCATTTAAGTTTAGTAGTAAAAGACTGGTTAATGATAACAATGCATCGTAAAACCTTCAG50.24509803921568626No Hit
CATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACC50.24509803921568626No Hit
CTGAATATACATTTGTTTTCTCAAATATTTGCTATGAGAGGTTGATGGATTAATTAAATAAGTCAATTCCT50.24509803921568626No Hit
GCTGGAGGCTCAGCAAGTGCCATGCTACAGCCCCTGCTTGACAACCAGGTTGGTTTTAAGAACATGCAGAA50.24509803921568626No Hit
GCTTCCTTCACTATGGGCAACCTTCCATCCTCCATTCCTCCTTCTCCCTTAGCCTGTGTGCTCAAGAACTT50.24509803921568626No Hit
CATTATCTTGACTGGTGATGGTTTTACAGGTGGGCCAAAACTAATCAAACTTTACACTTCATCTATATGAC50.24509803921568626No Hit
TTTTTGTAACGTTAGAAAGTTGGTTGAATTCTTTGAAATGCCTTGTGTTGTAGTTTTTTTCACCGCTCAAC50.24509803921568626No Hit
TCTGAGAGCTTTTGACATGATTAATCGATTCATTTATGGAAAAGGATGGGATCCTTATGTTGGATAAACTA50.24509803921568626No Hit
CTCTGAAAAGTATTCCAACGTGATATTCCTTGAAGTAGATGTGGATGACTGTCAGGATGTTGCTTCAGAGT50.24509803921568626No Hit
GACTTAGCCACAGTGCACAAAAGCAAACCTGCTAGAGAGGCAGTGAACACCACAGCTTCTCCCCAGCTAGG50.24509803921568626No Hit
GAACTGTGTTACATATTAGAGAGAACAAATCAAAAGTTACCTATCTCCATCGTTACCAGTAGAACATTAGT40.19607843137254902No Hit
AATAAACAGCCACCACATTTTCAAAACAGATTTGTAAAAATTGTATTTGTTAACACTGTGCACAAACGTTT40.19607843137254902No Hit
TATTTAAGGATTAAATCAAGACAACACAGATTACAATTATAATTGGTTTCGAAAAAAAAAAAAAAAAAAAA40.19607843137254902No Hit
GCCTATAACAGATACGATCAGGAAAGATTCAAAGGAAAAGAAGAAACGGAAGGCTTCAAAATTGACACTAT40.19607843137254902No Hit
TCCCTACACGACGCGGGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19607843137254902No Hit
ATACAATGTACTGTATCAAACTATTTTACATGAATGACACAAGTATTCTGAATAAAAAATAATTGAACATT40.19607843137254902No Hit
TCCCTACACGACGCGGGTACCTTCTTAATAATAAAAGGTCTTTCAATGGAAAAGTATACCTACCTGGGGCA40.19607843137254902No Hit
GTATAACATTCACCTGGCTGTCAACTTCTTGGTGTCATTGCTCAAGAAAAACTGGCAGAATGTCCGGGCCT40.19607843137254902No Hit
CTATGTACCTGTTACCACTTTCAAAAATCTACAGACAGTCAATGTGGATGAGAACTAATCGCTGATCGTCA40.19607843137254902No Hit
ATTCGAGGTGGAGGACATATTTTACCCTATGACCAGCCTCTGAGAGCTTTTGACATGATTAATCGATTCAT40.19607843137254902No Hit
GCGGGGTGCTGGCTTGTGCTTGTGATACCAGCTACTTGGGAGGCTGAGATGGGAGACCAGCCTGGGTAACA40.19607843137254902No Hit
GTTTTAAGTTATTAGTTTTTAAAATCAGTACTTTTTAATGGAAACAACTTGACCAAAAATTTGTCACAGAA40.19607843137254902No Hit
CAACTGGACATCATCGTGGCAGCTGCCCTGACAGAGCGCTCCTTGATGGGCATGGACTGGAAAGGATCCCA40.19607843137254902No Hit
GGCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGGGCTCTCTCCCCGACACATTTGTTAAAATCAAACCTG40.19607843137254902No Hit
GTCCCAGCTACTCGGGAGGCCGAGTCGGGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCTGAGA40.19607843137254902No Hit
GAATCTGTTTCATGGATTTTTCATCTTCTACCGTATGTGAAATTGCAAGTGTTTGAAGATTTATAAGTACA40.19607843137254902No Hit
TGTATGTACAATACAATGTACAATTATGTCTCTTGAGCATCAATCTTGTTACTGCTGATTCTTGTAAATCT40.19607843137254902No Hit
ATATCTACATTAATATACTTGAATGAAAATGTCCATTTACACGTATTTGAATGGCCTTCATATCATCCACA40.19607843137254902No Hit
CATTCAATTGTTGTTATTATGTCCTACAAGCATTAATTAATTAATACAAAAAAAAAAAAAAAAAAAAAAAA40.19607843137254902No Hit
GCTCTGGGCCTTCACAGAATGATGGCACCTTCCTAAACCCTCATGGGTGGTGTCTGAGAGGCGTGAAGGGC40.19607843137254902No Hit
CCTTCCCAAAAGAGAACATCAGAGGTTTTCATTGCTGAAAAGAAAATCGTAAAAACAGAAAATGTCATAGG40.19607843137254902No Hit
GTGGGTTGGGGTTGTTTTTACTACAAAATAAGTTACTTAGTTTTATAAAGACAAACCGATTGTAGCCAAAT40.19607843137254902No Hit
GGTTAGGAATAGTGGTGGGAGGAAGGGGAAAGGGCTGGGCCTCACCGCTCCCAGCAACTGAAAGGACAACA40.19607843137254902No Hit
GGTAATTATTCGAGGTGGAGGACATATTTTACCCTATGACCAGCCTCTGAGAGCTTTTGACATGATTAATC40.19607843137254902No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG30.14705882352941177No Hit
AGACAAGCCTGGCCACCATGGCAAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGACATGGTGGTG30.14705882352941177No Hit
TTCCCTACACGACGCGGGCTTTCGGAGGGTGGTGAGCTAGTCTGCGGACGCTGTATACCCTCCTCCACTTC30.14705882352941177No Hit
GATACGACTTTATTTTCTGGTAGATAGAAATAAATAGCTATATCCATGTACTGTAGTTTTTCTTCAACATC30.14705882352941177No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTTTTGGC30.14705882352941177No Hit
GGCCTTTGCTGTGAACTGCAGTGTTTCATACGAACCATCTTTCCTAGTGCATGAGAAATAAAGATTATTTA30.14705882352941177No Hit
ATATTTAATCAGTCTGTCTTTAGTTTTTGTTTTTCGTTTTGTTTTCATTTACAACCCACAGACCACTTTCA30.14705882352941177No Hit
GTACTAGTGCCATTGGAATAATAAATTTGATAAGGTGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
GCCCTGTAACTGTAATACTTTGGTTACCAGAATCACTTGAAAACAAATACAATAAAAAAATTTCTCAAGCA30.14705882352941177No Hit
GGTGAGACACTCCAGTACTGAGACCTAGAGTCCAGATGCTTGTAGGAGCCAAGTCGTGTTCTAAATATTTA30.14705882352941177No Hit
AGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGC30.14705882352941177No Hit
GGAGAAGAAAGAAATGAGTAGATAGAACAAAAAAGATGAGAAAGGAAGCCATATTGAAGTCAGGAGAGAGT30.14705882352941177No Hit
GTTTATTGGATATCCCATTACTCTTTTTGTGGAGAAGGAACGTGATAAAGAAGTAAGCGATGATGAGGCTG30.14705882352941177No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT30.14705882352941177No Hit
GCTTAGAAGAAAACCCCACAAACCCCATTACTAAACCCACACTCAACAGAAACAAAGCATACATCATTATT30.14705882352941177No Hit
ATAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
TCCCTACACGACGCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
CTGTATTGTAAGTGGAAAATGCAATGTCTTAAATAAAACTATTTAAAATTGGCGAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
GATAAATAAAATAAATCATTCATCCTTTTTTTTGATTATAAAATTTTCTAAAATGTATTTTAGACTTCCTG30.14705882352941177No Hit
CAGTTATTCTGTTGTTATAAAACTATACCCACTGCAAAAGTAGTAGTCAAGTGTCTAGGTCTTTGATATTG30.14705882352941177No Hit
TCATTGTATTAAAAGAATCTGTTTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
CCTCTGAGAGCTTTTGACATGATTAATCGATTCATTTATGGAAAAGGATGGGATCCTTATGTTGGATAAAC30.14705882352941177No Hit
CTCCCCGACACATTTGTTAAAATCAAACCTGAATAAAACTACAAGTTTAATATGAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
GAGTGAAGGAATGTGTTTTCAAAATATTATTTGGTAAAGCAACAGATTGTGATGGGAAAATGTTTTCTGTA30.14705882352941177No Hit
GGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGC30.14705882352941177No Hit
CCTTGGCAGTGTGGACATGAGCAGAGCGATGGAGCAGTCTCCTGCCCTCTCCCCTGTCCTGATGGCACTCT30.14705882352941177No Hit
GTATTTACCCTATAGCACCCCCTCTACCCCCTCTAGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
GCTCCTTTCCACCAGTGATTTGTATTAAGACAGCACTTATATTGTACAATACTTCAGACTGTTTTTTTTAA30.14705882352941177No Hit
ATAACAATCAGTGTGGATTTCCACTCTTTTCAGTCCTTCATGTTAAAGATTTAGACACCACATACAACTGG30.14705882352941177No Hit
GTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTAT30.14705882352941177No Hit
GTCTGTCAGGCCTTGAGACTTGAAACCAGAAGAAGTGTGAGAAGACTGGCTAGTGTGGAAGCATAGTGAAC30.14705882352941177No Hit
GATCCAAGGCAGATTTTCTTTGGTCTTGCTCCAGGATGGGTGGTGAATATGGCCGATAAGAAAATCCTAAA30.14705882352941177No Hit
TGAGAAAACTATGTAGCAAGATCCACTTCTGTGATTAAGTAAATGGATGTCTCGTGATGCGTCTACAGTTA30.14705882352941177No Hit
GTAGTAATGCGTATTAGGATGGAGAGAACTTAGAAGAGTGATACTGTAAAGCTAGTACTGAATTTGAAGTC30.14705882352941177No Hit
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
GGATAATTGCTCAGAACTAGAATGTTGATCCAGATATATACATTACCCATCCCTCTTGTTCCTTCTCAGCT30.14705882352941177No Hit
ACCCTTCCCTGCGGGCTCTCTCCCCGACACATTTGTTAAAATCAAACCTGAATAAAACTACAAGTTTAATA30.14705882352941177No Hit
GTCTCACAGAATCACCCCTCTACCTTTGATATTCCACTTAGCTGTAGAGTCCATCTGTTTGTCCATCTGCT30.14705882352941177No Hit
GAGTCCTTGGATTTAATGCCACAAATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGTGATG30.14705882352941177No Hit
GGGCTCATTAAGTACTAATAAGTACATAATTTATTAAAAACATACATAAGTGTCATCAAAAAGGTCCACAA30.14705882352941177No Hit
AACCAGCTCAGGACCAAGCAAAAGTTCTAATAAAATTAACTACTGCAATGTGCAATGAAGTGGCCTCTTTA30.14705882352941177No Hit
GGGCACAGTGGCTCACATTTATAATCCCAGCAATTTGGGAGGCCAAGGCAGGAGGATCTTTTGAACTCAGA30.14705882352941177No Hit
CATGACTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
TCAATAAACAACAGCTGAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
ACCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTCGAGTTCGCA30.14705882352941177No Hit
CCAATAAAGTGCCTTCTGGGCTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14705882352941177No Hit
AGAGTACACATTGAAATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGCCGAGTTCGCAACTCATGA30.14705882352941177No Hit
GGTAGGTTAATGTGTTCAGAAGTCGCTGTCCTTACTACTTTTGCGGAAGTATGGAAGTCACAACTACACAG30.14705882352941177No Hit

[OK]Adapter Content

Adapter graph