FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002879855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002879855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90193
Sequences flagged as poor quality0
Sequence length66
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA33383.700952402071114No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4100.454580732429346No Hit
TCCCTACACGACGCGGGGGAGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGAG1760.19513709489649972No Hit
TTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGAGAGGCGAGGGTTCGAGGGCACGAGT1360.15078775514729525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)