FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002880502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002880502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2151
Sequences flagged as poor quality0
Sequence length71
%GC26

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA61128.405392840539285No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG150.697350069735007No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG140.6508600650860066No Hit
ATATACTCTGCAGCTGTTAGAATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGTACACAGGGTAT140.6508600650860066No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA130.604370060437006No Hit
GTCTCTACTAAAAGTACAAAAAATTCGCTGGGCGTGGTGGCGGGCGACTGTAGTCCCAGCTACTCGAGAGG110.5113900511390052No Hit
CAGTGATATGACTGTTTTAGGATCTTAAGGGTAGAATTTTGTGAAAGGTGAGATCCTTTGGAATTGAGTTC100.46490004649000466No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT90.41841004184100417No Hit
GCCACCTGCAAGATGGACACGAGCCACAAGCTGCACTGTGAACCTGGGCACTCCGCGCCGATGCCACCGGC90.41841004184100417No Hit
GCCCAGCTGGGCGATGTGCGAGCTGATAGTGAGCGGCAGAATCAGGAGTACCAGCGGCTCATGGACATCAA90.41841004184100417No Hit
GAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGCTGTTAATTCTTCAGTCATGGCATTCGCAGTGC80.3719200371920037No Hit
GAATTTGATGGAACATGTTTCTTATGACAGTTGAAGCTTATGCTAATCTGTATGTTGACACCTTGTAATTA80.3719200371920037No Hit
GTCATGCCGGTGGTGGTGTGCACATTGAGCCCCGGTATAGACAGTTCCCCCAGCTGACCAGATCCCAGGTG80.3719200371920037No Hit
GAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCCTCCTGTCCTAGGAATTTGATTCTTCCA80.3719200371920037No Hit
GCATAATTTTAATCTCAGAGACAAATAAAGAAGAGTTTGAATTTGTAAGCCATTGAAAACATTGAACAATT80.3719200371920037No Hit
ACGCGGGGAGAAAAGAAAAAGAAAACATTACATAATTTGGCTAGAGCATAATAATTTGATTTTCTGGTTTT70.3254300325430033No Hit
GGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATATT70.3254300325430033No Hit
GTATTTGTAAAATTGATATGAAAAATAATTTCTCAAAGTCTATTGTTTGATCTAGTTATTTTAATAAAGGA70.3254300325430033No Hit
GATCAGATGCTTGAAATTTATCACTTTTCACTTGGTTCTTATACTGAATGCCGACTCTGCTCTGTGTTAGA60.2789400278940028No Hit
ACCCTGACTAAAGCTTGAAATGCTACATTTCCAAGGTGAAGATGTGTGGGCACATGTTATGGCAGATTGAA60.2789400278940028No Hit
CTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCAGATGCCTGTAGTCCCAGTTAACTCGGGAGACTG60.2789400278940028No Hit
AGGTAGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTGGTGACAAAGCAAAAAAGACTGCA60.2789400278940028No Hit
AATTTATTTCTGCTCTATAAGTTTTATGATTTTTATTGAATTTAAATATTGCAGCAGAGAGTACAACCTGA60.2789400278940028No Hit
GCCTCCTTACCTGTGAGGAATGCAAAATAAAGCATGGATTAAGTGAGAAGGGAGACTCTCAGCCTTCAGCT60.2789400278940028No Hit
GGAATATGTGACGTAAGCAATAAAGGGAATGTTAGACGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.2789400278940028No Hit
CCATTAAAGAGATCCTGGGGACTGCCCAGTCAGTGGGCTGTAATGTTGATGGCCGCCATCCTCATGACATC60.2789400278940028No Hit
GGGCCATTCAGTGCAAGAAGAAACAGCTTCTTATTCCCCAGTATGCCCTGACAGCACTGATGGACCACATC60.2789400278940028No Hit
GTGATCCTCCCAGCTACTCGGGAGGCTGAGGGATGAGAATCACTTGAGCCTAGAGGTGGAGGTTGCAGTGA50.23245002324500233No Hit
GGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAG50.23245002324500233No Hit
CCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.23245002324500233No Hit
GGGTAAAGACCATACGTTGGAGGATGAGGATGTCATTCAAATTGTGAAGAAGTGAAACCTTTCCCTTTTCC50.23245002324500233No Hit
CGTCTCCCGGGTGACTGAATGTCTGACCACCGTGAAGTCAGTCAACAAAACGGACAGTCAGACCCTCCTGA50.23245002324500233No Hit
CTTTAAACCATTTCCATTTGTTTCTTTAACATTACCAAAAGCAGGGAACAAAGCTCTTATTCAACTGCGAA50.23245002324500233No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.23245002324500233No Hit
ATATAATGCATTGTTTGGTTTCTTTTACCAAATTAAGTGTCTAGTTCTTGCTAAAATCAAGTCATTGCATT50.23245002324500233No Hit
TTCCATGGCCTATGGTCCTGCCCAGCACGCCATTTCAACTGAGAAAATCAAAGCCAAGTACCCCGACTACG40.18596001859600186No Hit
CCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCCACACTCTCATTAAT40.18596001859600186No Hit
CTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18596001859600186No Hit
GATCAGCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAACATCCA40.18596001859600186No Hit
ATGATGTTAAATGTAATATAATGTATTTTCTTTTTATTTTGCACTCTGTAATTGCACTTTTTAAGTTTGAA40.18596001859600186No Hit
TTCAAATACAGTTCTATTAAAGAGTATACTCCTATTGGATGAAAAAAACCTAAAAAAAAAAAAAAAAAAAA40.18596001859600186No Hit
CATAAGAATTGTAAACATTGAACTGAACAAATTACCTATAATGGATTTGGTTAATGACTTATGAGCAAGCT40.18596001859600186No Hit
GTCCCAGCTGCGCGTCGCCAAAGTGACAGGCGGTGCGGCCTCCAAGCTCTCTAAGATCCGAGTCGTCCGGA40.18596001859600186No Hit
GTTTTTAGACCTTCTGGTCAGCTGTATTTGTGTAACAACTTTTGTAATAAATAGAAAAACCCTCAAAAAAA40.18596001859600186No Hit
GTGTCCCTGGCAGGCATTTACCAGGCCATGTGCTTTAACGTTACGGTAATACTTTACTTTAGGCATCCCTC40.18596001859600186No Hit
GCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCAC40.18596001859600186No Hit
ATCTTAGTTAATGTGTTCTTTGCCAAGGTGATCTAAGTTGCCTACCTTGAATTTTTTTTTAAATATATTTG40.18596001859600186No Hit
ATCCTACAGCATAATCAATAACTCGCATATGAAGTAAAAAGGAATACTGTGAAAGGGGAGTACTCTTGTAC40.18596001859600186No Hit
GATGAAATCAAGACGCAACAGCCCTCATCGAGGGATGCTCAGGTGGAGTCTCGTTCTGTCACCCAGGCTGG40.18596001859600186No Hit
GAATGGAATCATCCGTAATGGAATGGAAAGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGG40.18596001859600186No Hit
AAATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACT40.18596001859600186No Hit
TTAAATATGCTTCCACAGTAAAATCTGAAAAACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.18596001859600186No Hit
GTATTGGAAATGTATTATTTCAGTGGTAAATACTGCATATCTTACTGAAAAATTAAAACCTTTTAAAAAAC40.18596001859600186No Hit
GGAGGTGGTGAGAAGTGGTCAGATTCCAGATATGTTATAAAGGTAGAGTCAATGGGACTTTGAAGTAGATT40.18596001859600186No Hit
TCTTTAGCCTTGGTGAACTATGAAATACGAAGGCCTTAATTTTGTACAATAAACTTTTATTTGTATTCTGT30.1394700139470014No Hit
ACAAAACCCATATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
TCCCTACACGACGCGGGAGGGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.1394700139470014No Hit
GGATGATAATCTCAAGAAACTAAGGAAGAATAAATAAATAATATAAAAATAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
AATCTGAGCGTTCTCAACTTGGTTATTGTAAAAAAAGGAGAGAAGGATATTCCTGGACTGACTGATACTAC30.1394700139470014No Hit
AAATAATCTTTCGCAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
TCTTTATACACTTTGTAAGATTTACGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
CTTTCCCTACACGACGCGGGGGAGAATAGATACGACTATGAAAGGATAAGAGAGCTAAGATGACGTGACTG30.1394700139470014No Hit
CTTGTGAACTGCACAACTTGAGCCTGACTGTACATCTCTTGGATTTGTTTCATTAAAAAGAAGCACTTTTA30.1394700139470014No Hit
ATAATAAATGGGTTAATTTATGTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTAAAATAAAACCCATATTTACCCTATAA30.1394700139470014No Hit
CTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
GCCATAGCAAATAACTAAATGAAAGCATGGTTGTTTGCCAATAAAACTTTATTTACAAAAAAAAAAAAAAA30.1394700139470014No Hit
GCACTAAAAGCACTCTGAGTCAAGATGAGTGGGAAACCATCTCAATAAACACATTTTGGAAAAAAAAAAAA30.1394700139470014No Hit
CTCTTATGACTGTGTCCCTGGTTGTCAATAAAATATTTCCTGGCCTCCTGGAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
ACTCAAATGGGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
CTCCAGAAGAGGAGAAGAGGAAACACAAGAAGAAACGCCTGGTGCAGAGCCCCAATTCCTACTTCATGGAT30.1394700139470014No Hit
GGGGAGTCCGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGC30.1394700139470014No Hit
CTTTTAATTCATTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
GCTCTGAGATTTTATAAATTTATAAGCTATGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
GGTCACAGAGTCAGTTTCTGACTCTATCACAGTCCTGCCATGATGAGCCCTGTTCCTGCTCATCATGAAGA30.1394700139470014No Hit
CTTTTGTATGATTTCTAATGTATTTGTAATTTACCTAACAAATTGCCTAATCTGCTATGTTAATGTATTTA30.1394700139470014No Hit
AATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTT30.1394700139470014No Hit
TGGTGGCCCGGGTGTGGTCGCTGATGAGGTTCCTCATCAAGGGAAGTGTGGCTGGGGGCGCCGTCTACCTG30.1394700139470014No Hit
CATTCTAGAAGGGGTGGCTGGGTCTTCAAGGATCTCCTGTTTTTTTCAGGCTCCTAAAGTAACATCAGCCA30.1394700139470014No Hit
AAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1394700139470014No Hit
ATCTACAATCTTTCCCATTTGTTACTCCAGATCAGTGGCTCAGTGGATCCCTAATGTAACCTACATTTGCA30.1394700139470014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)