FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002880540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002880540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4096
Sequences flagged as poor quality0
Sequence length71
%GC37

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1102.685546875No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG952.3193359375No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA330.8056640625No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT320.78125No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG190.4638671875No Hit
GGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAA140.341796875No Hit
GTCTTATATTTCAAGTTAAGGTCCAAAAAAACTCCAGCTGTGAAAGCAACATAAATGGATTTTAAACTGTC130.3173828125No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA120.29296875No Hit
GTTGTAAACAAACAAGTTAAGGGCAAGATTCTTGCCAAGAGAATTAATGTGCGTATTGAGCACATTAAGCA120.29296875No Hit
GTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAAT120.29296875No Hit
GGAGATATACCTGATGCTAAATGACGAGTTAGTGGGTGCAGCACACCAGCATGGCACATGTATACGTATGT110.2685546875No Hit
CCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC110.2685546875No Hit
TCCCTACACGACGCGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA100.244140625No Hit
GTCGTTGGGATTTAGAGTGTATTAGTCACGCATGTATGGGGAAGTAGTCTCGGGTATGCTGTTGTGAAATT100.244140625No Hit
CATGAAATAGATCCACCTGCTTATTTTAAGCATATTAAAAAGGAAACTAATTGGACCATTTTCTATTTGTC100.244140625No Hit
ATACTGTAAAGTGTGTATTCTTGATGTTTATTGGCTCATGTGGACAGAAATGTACAGGGAGAATTACATTA90.2197265625No Hit
GTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTACTTCAAATTCCTCCCTGTACGAAAGGACAAGAGAA80.1953125No Hit
CTTTAGAACAATAATAAAAGAGCTAACATTCATAATCACAGGAGATATAGAAGACGAGGAGATAGAATGTG80.1953125No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTTTTGGC80.1953125No Hit
ATCCAAGCCTGCAACTGCAGAGACGAGAGATCTTTCTGCTGTCTATACTCTTGGAAAGCACATCCTAAGAT80.1953125No Hit
GTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCGGCCTGATGGAGAGAAGAAGGCATATGTTCGAC80.1953125No Hit
GTTTTGAAAAGCTATTAGCCAGGATCATGGTGTAATAAGACATAACGTTTTTCCTTTAAAAAAATTTAAGT80.1953125No Hit
TGCCCGAGGAGGACAGTAGCAGCACCCGTACAGTTGCTAGTTTGAGGCTGGTGTTGATATTCTGACAAGAA80.1953125No Hit
GCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTT70.1708984375No Hit
GAATAAATATTTTCATTAACTTCAAAAGTTTGAATTACTTTACATTGGCAGTCTTGTTTAGAAACTGATTA70.1708984375No Hit
CTCTTTGTACTTGAGGAGAAGCTTTGCAGTTAATAAATTCTGAGATAACAACTCACTAGTGTATTTTTGCT70.1708984375No Hit
CTTTTAGATCATGTAGCTGAGGCATAAATTTGTTGTGTACTATGTTTGGTATTTTGTCTTATTGTTTCTCT70.1708984375No Hit
CCTGATCGCCACAGCCCTTCTTGGAAGAAAGGCGTCTGTGTTTCAGGTTCCACGCGAGTCACCTCTTTCGT70.1708984375No Hit
GTTATAGTTTACTCAGCTTCACTGTTACATCCTAGATGAGTATTGTATTCAAAAATACTGGGCCTTAAGTC70.1708984375No Hit
GTATACACTGAATTGCTTTGCATGGTCTCATTTGAGATAATTGATGTAAGAATCCTGACTTTTTTTATATT70.1708984375No Hit
GTTACATGTTGCTTAGGCTTGGTTGCTATCTGTATGGTATAAATAATTCCATTTAGAAATTAAGAAATTAT70.1708984375No Hit
CTTGAAAGAGGGCTCCAGAAAAAGTAGATGCGTATCTGTACAAACAGATCCTACTGATGAAATTCCCACTA70.1708984375No Hit
GGCATAGGGGCCTTTGAATGGAACAAATGCTTTCACATCATTTAAAGTAAAAAAAAACCTCCAACAACTGT60.146484375No Hit
GTTCATTCATCTGGATCTTCAGATGCACATATGGATGCATCTGGACCCTCAGATAGTGATATGCCAAGTCG60.146484375No Hit
CACCTGGACCATTTGATTGTTTTATTTTGGAATTGGTGTATATCATGAAGCCTTGCTGAACTAAGTTTTGT60.146484375No Hit
GACACAGGTAAGTCTCGACCAAGACACATGACCCAGGGCCACTTTAATCTTGTTCTTAAATGCCACTTTAT60.146484375No Hit
GATTTGGAGCACTCTGAGTTTACCATTTGTAATAAAGTATATAATTTTTTTATGTTTTGTTTCTGAAAATT60.146484375No Hit
AAGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATA60.146484375No Hit
TTCCCTACACGACGCGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCC60.146484375No Hit
CCACAGAGGAGGCTCTCCATGCCAGCCACGGCTTCATGTGGTACACGTAGGCCCTGTGCCCTCCGGCCACC60.146484375No Hit
CAAATTAGCTGCACATCTATCATCAAGAGATTCACAATCAAGATCTGTATCAAGATAAAGGAATTCAAATA60.146484375No Hit
GATGACTAAATGAGTTGACACAGTAAAATTACTTCCATATGGTACAGTAACAACCTAACTCCCTTCTACCT60.146484375No Hit
TCACTACTGGTCTGTACTCCTTGGATTTGCATTTTTGTATTTTGTACAAAGTAAAAATAAACTGTTATGAG60.146484375No Hit
GCTCCACTGTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTCAGGAGGAAG60.146484375No Hit
AGACCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACCCCCGATTCCGCTACGACCAACTC60.146484375No Hit
GGTAAGTAGGCCTAACATGCTTCTACTTGAAGTCTCAGAAGAAGAGAACAAAGAGAATGGGATAGAAGCAA60.146484375No Hit
AAACTGTGTCCAGTTTCTCTGTGGTGTTCATGAAATAGCTAAAAGCAAATGAAGTAAAGGGCATACTATGG60.146484375No Hit
GTGATGATGTGAAAGAAATGGTGATTCTGGTATCATGGTGTTTATTTTCTTTCTTATAACTGCAGAGAAAA60.146484375No Hit
GGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATT60.146484375No Hit
GAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGC50.1220703125No Hit
GCTTAGTAAATGAGATTTGTGGAACTAAGTTATTAGTTACCTGAGGCTTCTTAAGAAAGTCTTCTTTTTTG50.1220703125No Hit
GTGGAAATGCCTCCGCTGAAGGCCCCGAGGGCGAAGGTACCGAAAGCACAGTAATCACTGGTGTCGATATT50.1220703125No Hit
TCCTGGAACAGCGCTACTGATCACCAAGTAGCCACAAAATATAATAAACCCTCAGCACTTGCTCAGTAGTT50.1220703125No Hit
AATTCTCCGTGCCACCTATCACACCCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1220703125No Hit
GCCCTTGCTGGCTACTGGGTGTTAGTTTGCAGTCCTGTGTGCTTCCCTCTCTTATGACTGTGTCCCTGGTT50.1220703125No Hit
TCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTACTTCAAATTCCTCCCTGTACGAAAGGACAA50.1220703125No Hit
ATGTGTAACTTGAAGCTAATTTGTACTACTGGATATCTGACTGGAGCCACAGATACAGAATCTGTATTGTT50.1220703125No Hit
GTATTGTCCATTCAGAAATGTGTGACCCTTCATTTATGGATATTGACTATATGTAATGCAGTGCTATCCCA50.1220703125No Hit
AGTAAATACAGTCACAGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1220703125No Hit
GTCTTAAATAAAGAAGAGTAAACTTATTTTTTATAGAGGGTGAAGGATGCTGGAAGGGTAAGGATTTAGGA50.1220703125No Hit
GGATTTTATATGCCAATCATCCGTGGTTGATGTAGTGAAAAAGGTCTGGACTGTTAACATTCTCCTAGGAA50.1220703125No Hit
GGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1220703125No Hit
GCCCCGGCAGGTTTGAAGCTGCTTCTTCGAATTTGCAATTCAATATGAAAATCACCTCGGAGCTGGTAAAA50.1220703125No Hit
GTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCC50.1220703125No Hit
GGGTTGCAGTGAGCTGAGATCGTGCCACTGCGCTCCAGCTTGGGCGACAGAGTGAGACTGTCTCAAAAACT50.1220703125No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACACTATAG50.1220703125No Hit
CAGTATGTGTAACTTGAAGCTAATTTGTACTACTGGATATCTGACTGGAGCCACAGATACAGAATCTGTAT50.1220703125No Hit
GTTCGTGCTGTAAGACCTAAAGTTCTTATGAGATTGTCCAAAACAAAGAAACATGTCAGCAGGGCCTATGG50.1220703125No Hit
CTGGAGGACCTGTTGATGCTAGTTCAGAGTATCAGCAAGAGCTGGAGAGGGAGCTTTTTAAGCTCAAGCAA50.1220703125No Hit
CCACTGCTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGAT50.1220703125No Hit
GAACTGGTTGACTACAAGTCTTGTGCTCATGACTGGGTCTATGAATAAGAGGTGGACACAACAGCAGTCTC50.1220703125No Hit
TTTATGAAGAATGCAAAATGGAATACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTCCTACAAAG50.1220703125No Hit
GAATAAACTTTTGAAACACTAATGTAGTATGCTCCGTATAGTGATTGTAGCTGTTCCTCTGGATTCACCAT50.1220703125No Hit
CTGTTGGATCGGGTTCTAAAGGAAAGGGTGGAGAGATTCAACCAGTTAGCGTGAAAGTTGGAGATAAAGTT50.1220703125No Hit
ATGCTATATCTATGTACCTACTGACACATTTTTCTCCATAAAAGTACTTTTAAAAATTAAAAAAAAAAAAA50.1220703125No Hit
ACACAAAGTTTCTCATATCCTGTTCAAGTTAATCAACATCAAGCACATGGGGATGCTTTAGGGTGAGTCTA50.1220703125No Hit
GAATTCAGTAATGGCATTTTGTCATGTCAAACTGTGAACATAAATTTGTACTGTACAGTCCTCATATACAA50.1220703125No Hit
GATGTGTAACGAATTCTTTGAAGGCTTCCCAGATAAGCAGCCCAGGAAGAAATGAAAACTCCTCTGATGTG50.1220703125No Hit
CCTTAAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1220703125No Hit
GTGCTGGGATTATAGGCATGAGCCATGGCACCCAGCCTTAAAAATCTCATTGTTAAATGCTACTTTTCTAT50.1220703125No Hit
TCCCTACACGACGCGGGGAACTTCCAGGAGTATGTCACCTTCCTGGGGGCCTTGGCTTTGATCTACAATGA50.1220703125No Hit
TTCCCTACACGACGCGGGGGACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTGCCACCT50.1220703125No Hit
GTTTGGCATCTGCAGTACACCAAGCACATGATTCATGTCTGAGCCAGGTCTGCTTATTCTCCCATTGGGCA50.1220703125No Hit
GGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCT50.1220703125No Hit
CTTCTCAGAAAACAGATGCAGAAGCTACAGATACAGAGGCTACAGAAACATAAATGAGCTGACTTTAGTGA50.1220703125No Hit
GTATTGTATTCAAAAATACTGGGCCTTAAGTCTTCATAACAATCCTGATTTCCACTTAGAGTAAGCATAAA50.1220703125No Hit
ATATGATTCCGATTTCATGGTGTTGTGTGTTACAGAGGATAATAGAACTTATAGAATGTTTTCTTTCATCT50.1220703125No Hit
GAATGCCATATGGAGACACTAGCAAAGACTGGCATGATGCATTGATGAGCCAAGAAACTCCTGGAATGATC50.1220703125No Hit
GGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAA50.1220703125No Hit
GTAATCATCCCAGCTGGTGTAATAATGAATTGTTTAAAAAACAGCTCATAATTGATGCCAAATTAAAGCAC50.1220703125No Hit
GTCCCAGCACCGATGGCATTCCCTTTGCCCTGAGTCTGCAGCGGGTCCCTTTTGTGCTTCCTTCCCCTCAG50.1220703125No Hit

[OK]Adapter Content

Adapter graph