FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002880922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002880922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1571
Sequences flagged as poor quality0
Sequence length66
%GC17

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70845.066836409929984No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC90.5728835136855506No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.4455760661998727No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.4455760661998727No Hit
GGAACGAAACAAACAAGACCAGATACAGAAAAAAAAACGAAAAGAAACAAGAAGAAACGGACAATA50.31826861871419476No Hit
TTCTTATACTCTAGAATATACAAAGACAAAAGGAGATTCTGATGAAGAAGTTATTCAAGATGGAGT50.31826861871419476No Hit
CCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAAAACTGCTTGAACCCAGGAGGCAGAGGCTG40.2546148949713558No Hit
GTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.2546148949713558No Hit
GACCCTACTGTTGCAGGCAGAGCGCCGTGCCCTGTGTGCCTGCTGGCCAGCGGGGCACTGAGGACC40.2546148949713558No Hit
AAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.19096117122851686No Hit
GCCCTAGCCCTCAGCCCACCTGGGGAGTTTACTACCTGGGGACCCCCCTTGCCCATGCCTCCAGCT30.19096117122851686No Hit
ATTCATAGCATTTCCTATATTCTGTTATAATTATTTCATTGATTCATAAATTTCTTTGAAAAATAA30.19096117122851686No Hit
GGAAAACACAACTCCAGCCCAGCCTAAGAACCTGTCTCCCAGGGAGCAGGGGAAGACACAGCCACC30.19096117122851686No Hit
ATTTAACACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACACCCAC30.19096117122851686No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC30.19096117122851686No Hit
CAGTAATAAATATGTAAGGCCTTTCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.19096117122851686No Hit
GAAACTGGCCACCCAGCTGACCGGACCGGTCATGCCCGTCCGGAACGTCTATAAGAAGGAGAAAGC30.19096117122851686No Hit
GAATAAACAACTGCTCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.19096117122851686No Hit
CATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCA20.1273074474856779No Hit
GGATTGTTTGAGCCTGGGAGGTGGAGGCTACAGTGAATCATGTTTGCATCATTGCACTTTAGATCG20.1273074474856779No Hit
TGTCAGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCTTGGCCTCCCAAAGAGC20.1273074474856779No Hit
TGTCAGTCAGGCTGGTCTCAAACTCCTGCCCTCAGGTGATCCACCCACCTTGGCCTCCCAAAGAGC20.1273074474856779No Hit
GCAAGTAAACGCATGACCTGCCATAAGCGGTATAAAATCCAAAAAAAGGTTCGAGAACATCATCTA20.1273074474856779No Hit
TAATTAAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCTTTGTAAAATTGACAGAGAGG20.1273074474856779No Hit
GGTTGGAGCTGTAACTGTGAGGGACTGAAATTAGGGCCAGGCACAGTGGTTCACGCCTGTAATTCC20.1273074474856779No Hit
GCCGGTGTAAATGTTGAGCCTTTTTGGCCTGGCTTGTTTGCAAAGGCCCTGGCCAACGTCAACATT20.1273074474856779No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAA20.1273074474856779No Hit
GGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGAGGATCACAAAGTCA20.1273074474856779No Hit
GTTATATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1273074474856779No Hit
CATAACACCTGGTTATATATGAAATACTCATATGTTTATGACCAAAATAAATATGAAACCTCATGT20.1273074474856779No Hit
CCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1273074474856779No Hit
TAACAGGTCAACCTCGCTTCCCCACCCTTACTAACATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1273074474856779No Hit
GCACGACAACACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1273074474856779No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG20.1273074474856779No Hit
GGCTCATCTACAGTGGCAAGCAGATGAATGATGAGAAGACAGCAGCTGATTACAAGATTTTAGGTG20.1273074474856779No Hit
GAATACTAATGATGGATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1273074474856779No Hit
GTTCTATGTATGTCCCTGGGAAGCTGCATGATGTGGAACACGTGCTCATCGATGTGGGAACTGGGT20.1273074474856779No Hit
AAATTCACTCTGACAATGAGGCATCCCTGGAGTCTCTCTGAATCTGCCGTGATTCTGGGAGCTGCC20.1273074474856779No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)