FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002881015

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002881015
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5368
Sequences flagged as poor quality0
Sequence length71
%GC25

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA182834.053651266766025No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG210.3912071535022355No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG130.24217585692995527No Hit
GGTCATTGAGCATATCCAAGTGAACAAAGCACCTAAGATGCGCCGCCGGACCTACAGAGCTCATGGTCGGA120.22354694485842028No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA110.20491803278688525No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTTTTGGC100.18628912071535023No Hit
CTTTTGTTGACTCCAGGTAATTAAGACAGGAGTGGAATTATCTTGCAATATGTTTGAGTTTATATTTATGC100.18628912071535023No Hit
TTACTGGGAGCTGCTATTTTATATTATGACTGCTTTTTAAGAAATTTTTGTTTATGGATCTGATAAAATCT100.18628912071535023No Hit
AGCTGAAGAAGCGAAGAAGAGCCTTAAAGGCTGCAGCAGCAGCCCAAAAACAAGCAAAGCGGAGGAACCCA100.18628912071535023No Hit
GAGTTTGCTGCACGCCTTAATAAAGTGGAAATGGAACGTCAGAATTTAGCAGAAGCAATTACACTGGCCGA90.1676602086438152No Hit
CAGGACTTAAGACAAATGGGACTGATGTCATCTTGAGCTCTTCATTTATTTTGACTGTGATTTATTTGGAG90.1676602086438152No Hit
GTGTGAATGAGTTTCCTTGACTTACACTAGATTTTGTTTTGGCTTATAATGACAAGAAAATGGAATTTTTT90.1676602086438152No Hit
GGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACC80.14903129657228018No Hit
GGGGAAGCAGTGATTTTAAAACCTCAAGTTTTTAAACATGATTTATATGTTCTGTATAATGTTCAGTTTGT80.14903129657228018No Hit
GAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTCAGGAGGAAGCAGCACTAAAAGCACTCTGAGTCAAGA70.13040238450074518No Hit
GGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAAC70.13040238450074518No Hit
CATCAAGGGAATGGGTACTGTTCAAAAAGGAATGCCCCACAAGTGTTACCATGGCAAAACTGGAAGAGTCT70.13040238450074518No Hit
TCCAGGAACCGAACCGGGTTTGGATACAGACCCAGTCACACCATCCATGAAAAGCTGTTTCTATAATATGA70.13040238450074518No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC70.13040238450074518No Hit
GGTTTGTAATGCAGGTAGAAAGACCTTTTTCAGAGTTAAGAGTTTGATCCGACAAATGAGCTATTTTGATA70.13040238450074518No Hit
ATGGACAGTGGGGCCTGGTTCAGGACACAGTCAGGAGGCAGAAGCAACACCGATCACTCCAATGGGGAAAA60.11177347242921014No Hit
GCCCTTGCTGGCTACTGGGTGTTAGTTTGCAGTCCTGTGTGCTTCCCTCTCTTATGACTGTGTCCCTGGTT60.11177347242921014No Hit
AGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATATTATAAGGTGGATGAGAATGGCAAAATTAGTCGCCTT60.11177347242921014No Hit
CCTTGAAAATAAGGTGTCTACAAGGTGTTTTGTGGTTTCTGTATTTCTTCTTTTCACTTTACCAGAAAGTG60.11177347242921014No Hit
GGAGAGGAATACTAATTATCCATTCCTTTTGGCCCTGCAGCATGTCATGCTCCCAGAATTTCAGCTTCAGC60.11177347242921014No Hit
GGATGTTCCTTCAGGAGGAAGCAGCACTAAAAGCACTCTGAGTCAAGATGAGTGGGAAACCATCTCAATAA60.11177347242921014No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT60.11177347242921014No Hit
GGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAA60.11177347242921014No Hit
GGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGG60.11177347242921014No Hit
GCCTTCATTGCCTTAACTGGAGCCCCATCAGCTCCAGCTGCTCTGTCTTCTTTGCCCACAATGCTTTGCCC60.11177347242921014No Hit
GATTTGTTGAATTTGAACGCCATGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.11177347242921014No Hit
ATTAAGCACTCTAAGAGCCGAGATAGCTTCCTGAAACGTGTGAAGGAAAATGATCAGAAAAAGAAAGAAGC60.11177347242921014No Hit
GTTATGATTCTGAAAGCAAGGAATTTAATGCAGAAGTACATCGGAAGCACATCATGGGCCAGAATGTTGCA60.11177347242921014No Hit
GCACCAGATTAAACAGGCTGTGAAGAAGCTGTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCGGC60.11177347242921014No Hit
GGTTGGGACTTGGCATTGCATCTGATTTAATGAACTTAAGTCTGTGAATAAGCCTTTGTGTTAACGACTGG60.11177347242921014No Hit
GTATGTAGTGGCTTCTTTTGAACTGTTAGATGCTGAATATCTGTTCACTTTTCAATCCCAATTCTGTCCCA60.11177347242921014No Hit
GGTCTTGGATGTCGGGTTCGACCACTTGGCCGATGGGAATGGTCTGTCACAATCTGCTCCTTTTTTTTGTC60.11177347242921014No Hit
GTAGTTCCTCTTGACAAAATCTTCCCTTTTTGATAGTTTGGAACAGAGCCACTGTATGGTTACTGGTAGAC60.11177347242921014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)