FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002881342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002881342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2011
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA48724.216807558428645No Hit
GGACAACAAGCTCCGTGAAGACCTGGAGCGACTGAAGAAGATTCGGGCCCATAGAGGGCTGCGTCACTTCT190.9448035803083044No Hit
GCCCCAGAATGGCCAAGTTTCTTTCCCAAGACCAAATTAATGAGTACAAGGAATGCTTCTCCCTGTATGAC180.8950770760815515No Hit
GGTAAAAACAGAACAACTTTTTAAGACTTCTTGAAATTTTACGATTTTCCTTCTGTTTTTCTAATTTCTCT160.7956240676280457No Hit
ATGCCAAATTAGCATTTAGTATTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCA150.7458975634012929No Hit
TGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTGGCCGGGCGTGATGGTGGGCGCCTGTAATCCCAG150.7458975634012929No Hit
CCAGTAATCTGTTTTATTAGGAAACTTTTCTAGCCTTCCTTTCAGTTACGGGATTTATTGAAAACTACCTC130.6464445549477871No Hit
ATCGTATGTTAGATTTTTGATAAAATTTGGCCAATTTTTACAGAAGAAATTCTCTGATCATTTAGTTCTAT130.6464445549477871No Hit
CCTGAACTGTAATTATTTCAGAGAAGTCCTGAAATCATTTTGGTCCTGATTTAGAGGTCTTCTTTGTCTTT130.6464445549477871No Hit
GTACCAGCGTGTGTACCAGTCCCTCTGCCCCACATCCTGGGTCACAGACTGGGATGAGCAACGGGCTGAAG130.6464445549477871No Hit
GTTGTAAACAAACAAGTTAAGGGCAAGATTCTTGCCAAGAGAATTAATGTGCGTATTGAGCACATTAAGCA120.5967180507210343No Hit
ATGTAGTAGGTCTTTAAAAAGTTCATGAAAATGTATGTTATATTAAGAAATACCATAAAAGGATTCCACAT120.5967180507210343No Hit
ACTTTGAACATATCTGGACCACCTCTGAAGGCAGGGAAGACTCGAACCTTTTATGGTCTGCATCAGGACTT110.5469915464942815No Hit
ACTTGAAAGAGGGCTCCAGAAAAAGTAGATGCGTATCTGTACAAACAGATCCTACTGATGAAATTCCCACT100.49726504226752855No Hit
CCCCAAGGGAGTGGGTGGAAGACACGCAGCTATGGATCCAGCAGGTGTCCAGCACCCCTAGCACCAGGATG100.49726504226752855No Hit
ATTACAAATTGGATGGAACTGTGTTTTTTTCTGCTTTGTTTTTTCAGTTTGCTGTTTCTGTAGCCATATTG90.44753853804077576No Hit
GTTTAGATGTAGATTCTCTGGTCATTGAGCATATCCAAGTGAACAAAGCACCTAAGATGCGCCGCCGGACC90.44753853804077576No Hit
ACCCTATATCCCCCGCCCGCGTCCCTTTCTCCATAAAATTCTTCTTAGTAGCTATTACCTTCTTATTATTT90.44753853804077576No Hit
AAGTCCTAATAGTAGAAGAACCCTCCATAAACCTGGAGTGACTATATGGATGCCCCCCACCCTACCACACA80.39781203381402286No Hit
AAAGACAAGAGTGTTGGACCAGTATTGCAGTTCTGTAGTGTCATTTCTTATAAAAAACAAAACAACAACAA80.39781203381402286No Hit
CTCCAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGCGAGGCAGAGATTGCAGTGAGCCAAGATCAAGCCA80.39781203381402286No Hit
GAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAAT80.39781203381402286No Hit
GCTGGGAGGAGGTGGATGACTTCTTTACAAAGGAAAATGGTAGCAGCTTCAGTGAGAAACTGCCCTTACAA70.34808552958727No Hit
TCCTAAATCATGACTTACCTGCTAATAAAAACTCATTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.34808552958727No Hit
ATCTCCAACATGGTGAAACCCTGTCTTTACAAAAAATACAAAAATTAGCCGGGCGTGGTGGCATGCGCTTG70.34808552958727No Hit
GCACGGAGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGAT70.34808552958727No Hit
AAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATAGCTCCCTCTGGGCCGCTTCTGGCCTCTT70.34808552958727No Hit
GTGGCGAGTGCCTATAATCCCAGCTACTCAGGACGCTGAGGCAGGGAGAATTGCTTGAACCCAGAAGGCAG70.34808552958727No Hit
GCGCTACAATTACCTAAAACCTCGGGCAGAAGAGGAGAGGAGGATAGCAGCAGAAGAGAAGAAGAAGCAGG70.34808552958727No Hit
ATTGTAGATGAACTGAAGCAAGAAGTTATCAGTACCAGCAGCAAGGCAGAACCACCCCAGTGCACCTCCCT70.34808552958727No Hit
TCCCTACACGACGCGGGGCGGTTCTGGGAGCAGCAAGCCCACGGGTAGCAGCCGAGGCCCCAGAATGGCCA70.34808552958727No Hit
GTCCTCGGACCAGCCTTACCTGTGACACTGCACCCTCACGGCCACCCGACTACTTTGCCTCCTTGGATTTC60.29835902536051717No Hit
ACACGACGCGGGCACTTTAAAAACGTGTGAAAGGGTTAAGAGGGAAAGATACTGCCCAAGTATTTGAATCG60.29835902536051717No Hit
GGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCCAGCAGATTGCTTGAGCTCAGGA60.29835902536051717No Hit
GGGCCGGCTTCATGCCAGTGCGAGGGCGTCCCGTGCCCACGTACATACGTATGTCTCCATGAGTTCTGGGC60.29835902536051717No Hit
GAATAAAGGTTCCAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.29835902536051717No Hit
GTTGTACACAGGGTATTTCTAGAAGCAAAAATAGACTGGGAAGATGCACAACCAAGGGGTTACAGGCATCG60.29835902536051717No Hit
GTTATATAGTAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.24863252113376427No Hit
GACTTGCACATTTAGGTTGGTTGATTTAGAATTCATTGTTTGTAGAATGGTGTGCTTTTCCAACTACAGAT50.24863252113376427No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG50.24863252113376427No Hit
GGATATCTGAAGGGGTATACTCTAGTTGAATATGAAACATACAAGGAAGCCCAGGCTGCTATGGAGGGACT50.24863252113376427No Hit
GCTATACTTTATTTATAGATAAATTTAAAGTCAATTTGGACTCAGAACAAGCAGTGAAAGAAGAAAAAATA50.24863252113376427No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.24863252113376427No Hit
GGCACAAGAATTGCTTGAACCCGGGAGGCAGAGGTTTCAGTGAGCTGAGATCATGCCACTGTACTCCAGCC50.24863252113376427No Hit
CTTTCCCTACACGACGCGGGCGAGATGAAAGGTTCTGCCATTACAGGACCAGTAGCAAAGGAGTGTGCAGA50.24863252113376427No Hit
CGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGG50.24863252113376427No Hit
GTACTTTCTGGGGTCTTAGATACAGAACTACGATATAAGCCAGACTTGAAAGAGGGCTCCAGAAAAAGTAG50.24863252113376427No Hit
TCTCCGTATGGCCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGAGCCAAGGAAGCCGCAGAAC50.24863252113376427No Hit
TTTATAAGAGAGCACTGGGTAGCCAAGTGATCTTCCCATTCACAGAGTTAGTAAACCTCTGTACTACAAAA50.24863252113376427No Hit
CCAAGATCGAGGGTCTGCAGAACCTGGTGAACCTGCGGGAGCTGTACCTTAGCCACAATGGCATCGAGGTC50.24863252113376427No Hit
CATCAGGAGTCGCACAGCCACCGCCGAGCGAGCTCACCATGTCGGAAGGAGCTGTTGTCACCATCACCACG40.19890601690701143No Hit
CACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATCATTACCGGGTTTTCCTCCAAAAAAAAAAA40.19890601690701143No Hit
TCCCTACACGACGCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCC40.19890601690701143No Hit
GCATGGAAAAATGGTTGATGGAAAATAAACATCAGTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
GCTTTAGAATGAAGGTCTTCCAGAAGCCACATCCGCACAATTTTCCACTTAACCAGGAAATATTTCTCCTC40.19890601690701143No Hit
GAAGATAGAGGAAGTACTTTCTGGGGTCTTAGATACAGAACTACGATATAAGCCAGACTTGAAAGAGGGCT40.19890601690701143No Hit
GAAAAGACCAAACTAGCTTAGCTCATTAGCTGGGCATGGTGGTGCCCGCTTGTGGTTGCAGCTGCTTGGGG40.19890601690701143No Hit
ATATAATAAATATTCTGAGTGAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
TATGTGCACTGCGCGTGACCAGCCGGGCCCGCAGCCGCATCCTCAGGGCAGGGGGCAAGATCCTCACTTTC40.19890601690701143No Hit
ATTTAGGACAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
AAATATCACTCTCCTACTTACAGGACTCAACATACTAGTCACAGCCCTAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
TCCCTACACGACGCGGGGAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
ATAAAAAGTTTTCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
TCTTCGATGCCTATGTGCTTCCCAAGCTGTATGTGAAGCTACATTACTGTGTGAGTTGTGCAATTCACAGC40.19890601690701143No Hit
CTCAACTGCAGAAGCTTGGAAATATATTGTTTTCCTGAAGCATTAGCTTTCTCATTTTAGGTAGTAATTAT40.19890601690701143No Hit
GGATCCAGGAACACATCGATCTGGGTATCAAATATGACCCAAGCATTGGTATCTACGGCCTGGACTTCTAT40.19890601690701143No Hit
CATAAAATCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAAGCTGGTTTCAAGCCAACCCCATGGCCTCC40.19890601690701143No Hit
ATACTAGGCAGTGACAACTAACATGTTACTTCAACTAAAAGTGTATAATGGGTTGTCTTTTTATTTATGAA40.19890601690701143No Hit
GGATGGGGTGATCAACTGAGTAGAAACATTTGGAATAGACGTCTTGTTTTCTTGGCATTGATCTAGCACGA40.19890601690701143No Hit
GGGGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
GTTTTATATTCCTAATAAAGTATAGCGGAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.19890601690701143No Hit
GAGCTGAGATCGTGCCCTGCACTCCAACTTGGACAACAGAGTGAGACGCCATCTCAAAAACAAACAAACCA30.14917951268025859No Hit
GTTCAACATTTGAAGATTAATTAATATACTGAACCGCATTAGTAGTCTTAACAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GTCTCTTTAGAGGATCCTGTACACAGTTCCACTATTAAAACATTTCAGGTTGAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
TAACAATAGTGCCTTTAGTAAATTATTTTACAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GATTATTTTATTGCTTCAAAAGCAGTGGACTGTCTTTTGGATTCAAAGTGGGCAAAGGCCAAGAAAGGAGA30.14917951268025859No Hit
CGGTACCCATCCGGGGAGGAGCGTTGCATTGCCTGCAAGCTCTGCGAGGCCATCTGCCCCGCCCAGGCCAT30.14917951268025859No Hit
GCGCAGGAGGCTGGGGCAGGATAATTGCTTGATCCCCGGAGACAGAGGTTGCAGTGAGCCAAGATCCTGCC30.14917951268025859No Hit
ATGTTACACCATGTAAATAAAGGAAATAGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GTCACCATTGCAGATGCTTAAGTCAACTATTTTAATAAATTGATGACCAGTTGTTAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GGAAAACGCTTCAAAGAGGCAAATAACTTCCTGTGGCCCTTCAAATTGTCTTCTCCACGAGGTGGAATGAA30.14917951268025859No Hit
GCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATT30.14917951268025859No Hit
GGTCCGGCGCTACCTGGGCGATGCCTCGGTGGAGCCCGACCCCCTGCAGATGCCAACCTTCCCGCCAGACT30.14917951268025859No Hit
CTTAAGCAGCATGGAAAAATGGTTGATGGAAAATAAACATCAGTTTCTAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GGACTCTACAGAGATGAGCATCAGGATTTTATGGATGAGCAAAAACGACTAAAGAAGCTTCGTGGAAAGGA30.14917951268025859No Hit
ATAAAATGGTTACTAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
AGACAGTATTACACCCTGAATAAATAAGGTGTTGTTTTCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
ATCATCTGTAGGCTCATTCATTTCTCTAACAGCAGTAATATTAATAATTTTCATGATTTGAGAAGCCTTCG30.14917951268025859No Hit
GGTTTTCCCATCGTCTCTCTCGAAACTGGCCTGGCCCCTGACTTTGGAGAGCAGTGCCATGTTTGACCACC30.14917951268025859No Hit
CTACACGACGCGGGGCTCTCCGCCAGACCGCCGCCGCGCCGCCATCATGGACACCAGCCGTGTGCAGCCTA30.14917951268025859No Hit
GTACAAACAGATCCTACTGATGAAATTCCCACTAAAAAGTCAAAGAAGCATAAAAAGCACAAAAAAAAAAA30.14917951268025859No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT30.14917951268025859No Hit
GCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTAAAATAAAACCCATATT30.14917951268025859No Hit
CTCAGAATGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAAAGGGTGCAGTGAGCTGAGATTGTGCCA30.14917951268025859No Hit
GCACTAAATTACTCAAAATGTGCTGTAAAGTTTCTTCTTTCCAGTAAAGACTAGCCATTGCATTGGCTCCT30.14917951268025859No Hit
GGCCTCAAGCGATCCTCCCACCTCGACCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCTCGCCTGGG30.14917951268025859No Hit
CTTATGAACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
CATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTCTCCTACTCCTGCTCGCATCTGCTATAGTGGAGG30.14917951268025859No Hit
CGACGCGGGTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
CTCTAGAGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GGCTTATTTTAGTTATTTTAGTAGAGATAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGGAACTCCTGAC30.14917951268025859No Hit
CTATTTTTCGTGTCAAATATCTACTGTGCCCAAATGTACTCAATTTAAATCATTACTCTGTAAAATAAATA30.14917951268025859No Hit
CATTCAATTGTTATTATTATGTCCTACAAGCATTAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.14917951268025859No Hit
GTACATATGTGAATTAATAAGTAGGTAATGCATGGAATGAAACATGTCTTTTTGGAAAGATCAAGAAGGAC30.14917951268025859No Hit
GATGCACAAAGAGGACCACGCAAGATATGATAAAGATCTACATCACTGAATTTTGGTTCCATTTTTGTATC30.14917951268025859No Hit
GGATTATAGTTATTGTTTGATTATTTCAGGTTGAAAAGTAGAAGTTCCAAGGTTTTGATTTTGGTCTGGTC30.14917951268025859No Hit
GCCCAGGAGGTCAAGGCTGCAGTAAACTATGATTGTGCCACTGCAATTCAGCCTAGGCAACTGAGTGAGAC30.14917951268025859No Hit
GCAAACCACAGTTTCATGCCCATCATCCTAAAATTAATTCCCCTAAAAATCTTTAAAATAAAACCCATATT30.14917951268025859No Hit
GCCTGGGTGACAGAGCAAAACTCCATCTCAAAAAAGAGAAAAAGACTTCAATATTACAAAAAAAAATAAAA30.14917951268025859No Hit
GGTTTGAACCCAAAATGACAAAACGGGAAGCAGCATTAATACTAGGTGTAAGCCCTACTGCCAATAAAGGG30.14917951268025859No Hit
GAGGGCGGGAGGTAGATATAGGCCTGTTCTTTTTAGCAATGTGATTCTTGTTGTTGATTCTCTCTCTGGAG30.14917951268025859No Hit

[OK]Adapter Content

Adapter graph