FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002881456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002881456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2821
Sequences flagged as poor quality0
Sequence length71
%GC43

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA802.835873803615739No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA240.8507621410847217No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG200.7089684509039348No Hit
ACTTAACTTCACTACAGATTGTCTAGAAGACCTTTCTAGGAGTTATCTGATTCTAGAAGGGTCTATACTTG150.5317263381779511No Hit
TGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAAAAAAAAAAAAAAAAAAAAA140.49627791563275436No Hit
AATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAA120.42538107054236085No Hit
GTTCCTCCAGTGGAGACCAGTTGGGTAGTGGTGACTGGGTACGCTACAAGCTCTGCATGTGTGCTGATGGG100.3544842254519674No Hit
CCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTG90.31903580290677064No Hit
TGTACAGACAGAAGGATGTAAAGGATGGAAAATACAGCCAGGTCCTAGCCAATGGTCTGGACAACAAGCTC90.31903580290677064No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG80.28358738036157394No Hit
TCCCTACACGACGCGGGATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.28358738036157394No Hit
ATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.28358738036157394No Hit
GCATTACTTATATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAAAAAAAAA80.28358738036157394No Hit
TCCCTACACGACGCGGGGGATGGGCTACACACGTGCTACAATGGCGGTGACAGTGGGAGGCGAAGGAACGA80.28358738036157394No Hit
ATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAAT80.28358738036157394No Hit
CATTTAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.24813895781637718No Hit
ACCTAATACTGCAGACATTTGGTGGGTGCAGTAGCTCATGTCTGTAATCCTAGCACTTTGGGAGGCTGAGG70.24813895781637718No Hit
ACACTGAACTGACAATTAACAGCCCAATATCTACAATCAACCAACAAGTCATTATTACCCTCACTGTCAAC70.24813895781637718No Hit
ACCCTATGGAGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCTAAACTACCAAACCT70.24813895781637718No Hit
GATGAAGACTTCATTGGGTTTTATAGTGGCTTTCTGATTTTTGGTAGTCCATTGAAGAAGGGAGTTTGAAA70.24813895781637718No Hit
GGGTCGAAGGTGGATTTAGCAGTAAACTGAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACA70.24813895781637718No Hit
CTGGTAGATTACACGAGCTGTGCTCAGAACTGGATCTATGAATGACAGGAGGGCAGACCACATTGCTTTTC70.24813895781637718No Hit
GCATTAGGAATGCCATTGCGATTAGAATGGGTACAATGAGGAGTAGGAGGTTGGCCATGGGTATGTTGTTA60.21269053527118043No Hit
ATTCACTTGAACCTGGGAGGTGGAGGTTGCTGTGAGCTGACACCACGCCACTGCACTCCAGCCTGGGTGAC60.21269053527118043No Hit
GGGACCTGGAAGCTACTAAATAAATATCCAGTGGATGAACAAAATTTATACTTTCTTTCTGTTTTTCATCA60.21269053527118043No Hit
GGGCCGGAAGTTCGAGCGTGCCAGAGGCCGACGGGCCAGCCGAGGCTACAAAAACTAACCCTGGATCCTAC60.21269053527118043No Hit
CATTCAAGGCTGCATTCAAATGCCTTCCTTCCCATGAGACTTTTCTGATTCCCTGCTCTTCCTTTTCTATG60.21269053527118043No Hit
CAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGAA60.21269053527118043No Hit
ATTTTAGGCTTCTCATGCAAGCACAGATGCCATGGTTATTTTAGGTGTCATTTTTAAAAATTATATAGCTC60.21269053527118043No Hit
GTACGAAAGGACAAGAGAAATAAGGCCTACTTCACAAAGCGCCTTCCCCCGTAAATGATATCATCTCAACT60.21269053527118043No Hit
CTGTATTCACCAAGTCTCCCTATCAGGAGTTCACTGACCACCTCGTCAAGACCCACACCAGAGTCTCCGTG50.1772421127259837No Hit
AAGTAATGCATCTAATAAAGAGTATTCAATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
CTTAATGGACTGAGTAGCCACCTACTTGTCCGGCTAGAATGTTTGTTGATGTATGAGTTTAGATTAACACT50.1772421127259837No Hit
ATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
TTTCCTCACTATCTGCTTCATCCGCCAACTAATATTTCACTTTACATCCAAACATCACTTTGGCTTCGAAG50.1772421127259837No Hit
GACAAGAGGGAAACCTGATTTCCCTGTATCCTATTATATTTTAGGCTTCTCATGCAAGCACAGATGCCATG50.1772421127259837No Hit
CCTTACTGCATTCAATTTTTATTACTAGTCAAGGAAAATAAAAAATTATACACTGAATAGGAAATTTCAGA50.1772421127259837No Hit
GATTAATAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
GGGTCGAAGGTGGATTTAGCAGTAAACTGAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACC50.1772421127259837No Hit
GGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
CCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGAAAAAACC50.1772421127259837No Hit
AAATAAAAGCCTTCAGGCCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
CTGATGCTGCCTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
GCCTTTCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1772421127259837No Hit
GTTTCTGGGCCCACCCTAGCAGCCTGGTACTTTGGACAACCAAACAGATGAACGAACGGAGCACAGCAGTG50.1772421127259837No Hit
GCTCACATGAGGCCAGGAGTTTGAGACCAGCCTGGCCTACATGGTGAAACCCCATCTTTACTAAAAACACA50.1772421127259837No Hit
GTCTAGCCTCACTAGTAATGAAAGAATAAAAAAAATTAAAACATTAAGAACCATTTTCATCTTTAACATAT50.1772421127259837No Hit
ATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCC40.14179369018078697No Hit
GCCTCTGTTGATGCGTCTGTCTGTTCCTTGTGGAAATTCTTCCTGACATTCAAGGCTGCATTCAAATGCCT40.14179369018078697No Hit
TTTATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGACGAACAAAAAAAAAA40.14179369018078697No Hit
GTCTCAAAGGAGTAACTGCAGCTTGGTTTGAAATTTGTACTGTTTCTATCATAAATAAAGTTATGGCTTCT40.14179369018078697No Hit
GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.14179369018078697No Hit
GTCAAGTACTGTACAATGAAATTGTTTAAATTTTAATATGATTTAAGCTTTTTAGAAATTAAAATATTTTA40.14179369018078697No Hit
CCTACCTCCCTCACCAAAGCCCATAAAAATAAAAAATTATAACAAACCCTGAGAACCAAAATGAACGAAAA40.14179369018078697No Hit
GCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTT40.14179369018078697No Hit
GCCCTACACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGACCCCTGGACCTGGGGCCCAGTCGGC40.14179369018078697No Hit
ATTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTC40.14179369018078697No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.14179369018078697No Hit
CTCCTCGGTTTTTTTTTCAATAAAAGTTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.14179369018078697No Hit
ATATTGTATACTACCATAGTGAGCCATGATTTTCTAAAAAAAAAAATAAATGTTTTGGGGGTGTTCTGTTT40.14179369018078697No Hit
GTCATTCAGTGGAAAGATGCACGTTGATACTATTTTAAAGCACAAATAAACTCACTATACAATGGTCAAAA40.14179369018078697No Hit
CTTTTACTGTTTACCATTCACTATAATTCACAATTAAAATTGTGTGACTAAAAAAAAAAAAAAAAAAAAAA40.14179369018078697No Hit
TTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCA40.14179369018078697No Hit
GCACATTTACCAAGTATTTACTATGTAGGCATGTTAAACTCCAATAAAACATACAGCATTGAATCACAAAA40.14179369018078697No Hit
GCACCTAATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAA40.14179369018078697No Hit
CCCTACACGACGCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCC40.14179369018078697No Hit
CCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTC40.14179369018078697No Hit
AATAAAGACCTGAGAACCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.14179369018078697No Hit
TCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCACAGG40.14179369018078697No Hit
TCTGCCTGCATCCTGACGCGGTGCCGTCCCCAGCACGGTGATTAGTCCCAGAGCTCGGCTGCCACCTCCAC40.14179369018078697No Hit
TACATCCTGCATTACATGAATGGATTATTCCTAATAATTAATAAAAAGGTATTTTTTCTACTAAAAAAAAA40.14179369018078697No Hit
GACCTGGAGCGGAGCTGAGGCTCCTTCCCAGCAACACTCCGGTCAGCCCCTGGCAATCCCACCAAATCATC40.14179369018078697No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA30.10634526763559021No Hit
TTCTAGGACGATGGGCATGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCC30.10634526763559021No Hit
GTTTTTGGCTGTAGCGCCCTTTTGCCATGACAAAGCTGGGAAAGGAGACACGCAGTCTGTCGCATTTATTT30.10634526763559021No Hit
TGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAG30.10634526763559021No Hit
TCAGATGAAGACTTCATTGGGTTTTATAGTGGCTTTCTGATTTTTGGTAGTCCATTGAAGAAGGGAGTTTG30.10634526763559021No Hit
GGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10634526763559021No Hit
CCACAAGGGAATCAGTCATGCTCAACATGGCTGATTAGTTCTCTTTGGTATAAGCCAGTTTGCTTTAGATT30.10634526763559021No Hit
ATGTAGGCATGTTAAACTCCAATAAAACATACAGCATTGAATCACAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
CTTAAAAACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGGGTATACT30.10634526763559021No Hit
GATTTACTGGTTTGCCTTTCAGTTTGTTGAAATGTATTGTCAAGTACTGTACAATGAAATTGTTTAAATTT30.10634526763559021No Hit
CTCCAAGAGACGGGTCACGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
GATTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACCCTCCATAAACCTGGAGTGAC30.10634526763559021No Hit
CATTAGGCTTAAAAACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGG30.10634526763559021No Hit
TAATTGTACTCTATGGGAAAATTTCTTTGGAAAGATATTTTGTAAAACTTTTTTTTCCAAATAAAAACTTT30.10634526763559021No Hit
GTTAAATAAAAGATTGATGATATCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
ATTCCCGGACGTCTAAACCAAACCACTTTCACCGCTACACGACCGGGGGTATACTACGGTCAATGCTCTGA30.10634526763559021No Hit
ATATTTTTCATGATATCTGTAAAGCTTGAGTATTTTGTGATGTTCGTTTTTTATAATTTAAATTTTGGTAA30.10634526763559021No Hit
GAATCGAACCCCCCAAAGCTGGTTTCAAGCCAACCCCATGGCCTCCATGACTTTTTCAAAAAAAAAAAAAA30.10634526763559021No Hit
GACTATTTCTGTATGTCTCCATCTATTGATGAGGGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
ATATATGCCTGATGTTGCTAAATGTAGACAATGGTTAGAGAAGAATTTTCCAAATGAATTTGCAAAACTTA30.10634526763559021No Hit
ATCATATTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
CTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
GTATATGATTGCGAGTGGAAAAATAGGGGACAGAAATCAGGTATTGGCAGTTTTTCCATTTTCATTTGTGT30.10634526763559021No Hit
ATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAA30.10634526763559021No Hit
ACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTCTAGTAAGCCTCTACC30.10634526763559021No Hit
ACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTA30.10634526763559021No Hit
TAGATAAGTAATAAAAGTAATATCCTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
GTCCCATGTGTTGGTTGTCGTCGCAGTGTGGAGCGTCTCTTTTCCCAGCTTGTAGAGTCTGGAAATCCTGC30.10634526763559021No Hit
GCCCCCATGGGCTTTACCCTTCCCTGCGGGCTCTCTCCCCAACACATTTATTAAAATCAAACCTAAATAAA30.10634526763559021No Hit
GTTTAGAAATATATTTTAAATGTTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10634526763559021No Hit
GATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGATAGAATCTTAGTTC30.10634526763559021No Hit
CACTATTCCTCATCACCCAACTAAAAATATTAAACACAAACTACCACCTACCTCCCTCACAAAAAAAAAAA30.10634526763559021No Hit
TCCCTACACGACGCGGGATTTGGAGAAGGAACGAGAGAAGGAAATTAGTGATGATGAGGCAGAGGAAGAAA30.10634526763559021No Hit
CCTCTGGAGGTTGCAGTGGCTGAAGGATGCATCATGTGCTCCTACCCTGCTCTACCGCTTTTCTGGGTCAC30.10634526763559021No Hit
GGGACATAAAAGGAAATCCCCATTTGGAAGTACAGAAAGAAAGACTCCTGTTAAAAAGCTGGCTCCTGAAT30.10634526763559021No Hit
AGTTCTTAGAGACCATCAAAGAAAGTTAAAATCCCATACAATAATAGTGGGAGTCTTCAGCAACCCACTGA30.10634526763559021No Hit
ACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCC30.10634526763559021No Hit
ACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCC30.10634526763559021No Hit
GTATAAGATGGGGGGCGACATCGCCAACAGGGTACTTCGGTCCTTGGTGGAAGCATCTAGCTCAGGTGTGT30.10634526763559021No Hit
TAACAAACCCACAGGTCCTAAACTACCAAACCTGCATTAAAAATTTCGGTTGGGGCGACCTCGGAGCAGAA30.10634526763559021No Hit

[WARN]Adapter Content

Adapter graph