FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002881481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002881481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2204
Sequences flagged as poor quality0
Sequence length66
%GC16

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA106948.502722323049No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.3629764065335753No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.27223230490018147No Hit
GGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGAGCTTGTGTATAACATTCACCTGGCTGT50.2268602540834846No Hit
CTCAATGGGAGAATCAGCAGAACCTGTAGGATCTTATTTGGAATTGACATTCTCTATTGTAATTTT50.2268602540834846No Hit
GGTCAGAAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAA40.18148820326678766No Hit
GCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTT30.13611615245009073No Hit
GGGTTTCTGGTCCCTTCTGACAAAGAAATTGGCAGCAGAGATTCCATAAAAATTTCAATAAGTTTT30.13611615245009073No Hit
AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13611615245009073No Hit
ACATATGATATGTTTATTAAAATTGAAATAATGTAAAACACATGAATAAATTTGCAAAACCAAGAT30.13611615245009073No Hit
GATTGAGGATGTCACCCCCATCCCCTCTGACAGCACTCGCAGGAAGGGGGGTCGCCGTGGTCGCCG30.13611615245009073No Hit
TTCTTATGCAGTAAAATTACTACACAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13611615245009073No Hit
TATTAGGAGACATGCATTTGTAAAAATTAATAAAGATGACAAGTCAGTTGTCAATGGAATTGAGCT30.13611615245009073No Hit
CCGCAGAGATGCCCCTGCTGGCCGCAAAGTGGGTCTCATTGCTGCCCGCCGGACTGGACGTCTCCG30.13611615245009073No Hit
GTATTATATACTAACTAGATTTTTCCACATCTGTATAGTATATTATATGTATTTTGTGGTATTGAG30.13611615245009073No Hit
AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13611615245009073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)