FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002881485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002881485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3259
Sequences flagged as poor quality0
Sequence length66
%GC20

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA130239.95090518563977No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.3068425897514575No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.245474071801166No Hit
GTAAAAGACTGGTTAATGATAACAATGCATCGTAAAACCTTCAGAAGGAAAGGAGAATGTTTTGTG80.245474071801166No Hit
GTTTAGTAGTAAAAGACTGGTTAATGATAACAATGCATCGTAAAACCTTCAGAAGGAAAGGAGAAT70.21478981282602025No Hit
GATCTATATTCCCTTATTGCATTTTCCTTATGTATAATTTTCCAGATGGTGATGTTACTTTTCAGT70.21478981282602025No Hit
AAGTAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTCAGATTAAAACACTGAACTGACAATTA60.18410555385087451No Hit
GCTTATGAGTACTGTTGATCCCAAGTTGAATCATGTAGCTGCTGGTCTCGTTTCACCAAGTCTGAA50.15342129487572875No Hit
AAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.15342129487572875No Hit
CTACTGAGTAGGCGGCGATTTTTGTATGTTATGAACATGCAGTTCATTATTTTGTGGTTCTATTTT40.122737035900583No Hit
GACCCAGCCAGAGTCCAGGTTTCCACAGGAAGCAGATGGAGCTCCTTTCACAGGGGCTCTGAGAAA40.122737035900583No Hit
GCAAGGGGCTCTGCCCTCCCTCCTTCCTTCTTGCTTCTCATAGCCCCGGTGTGCGGTGCATACACC40.122737035900583No Hit
GGACAAGTATGCCCCGCTCAGGGTGTGATTTCAGGTGGCTTCCAAACTTGTACGCAGTTTAAAGAT40.122737035900583No Hit
AAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.122737035900583No Hit
GAACTGGCCTCCCCAGCCCACTGCCACAGGCTGTGCTTCTAGGACTGTGGGGCCCCTGTGTGGCCC40.122737035900583No Hit
GTATTATAGGTTGGTTAAAGTGATGGCCTTTTTGATGGGTTTTGTTGTGTCTTGTGAACAAGTCGT40.122737035900583No Hit
CTTATATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAAAAAAAAAA40.122737035900583No Hit
ACTCAGGAGGCTGAGGGGCAGGAGGATAGCTAGAAACTGGGAGGTGGAGGTTGTGGTGAACCGAGG40.122737035900583No Hit
CTCCAGCCTGGGTGAAGAAGCGAGACTCCATCTCAAAAAAAAGGCTTACTGAGCCGCTTGTGTATT40.122737035900583No Hit
GAGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGAGAGGCGAGGGTTCGAGGGC40.122737035900583No Hit
GTATTTATGTTGCACATTTGGGGCAAGTACACTCGTTCGTAGATTCAGTTACATCCATCTGTCATC40.122737035900583No Hit
GTACTATTCTGGATTGAGAAAACCTATATCCATTCTTTATATCAATGTATAGTTTTAGTCTCCTAA40.122737035900583No Hit
TTTCTAGTGTTTCTGTGTTTATTACTGTTCAGCATCATCTTGGTTATATACTGAAAATCAAACACT40.122737035900583No Hit
TCTACGTGTGAGCACCCAAGGGTAACAACCAGATGGCTTCACTGAAACCTGCTTTTGTAAATTACT40.122737035900583No Hit
CCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCCGCATAAGCCTGCGTC40.122737035900583No Hit
GGATCTAAAAGCAATTAAAGACTGTGTCTGCCCTTTAGAAGCTAAGAATTTGATTCATGATGCAAA40.122737035900583No Hit
ATTCACAAGCGACTCATTGACTTGCACAGTCCTTCTGAGATTGTTAAGCAGATTACTTCCATCAGT40.122737035900583No Hit
ACTCCAGCCAAAAATGCACAAAAGTCAAATCAGAATGGAAAAGACTCAAAACCATCATCAACACCA40.122737035900583No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT40.122737035900583No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC40.122737035900583No Hit
CTACTGCTGCCTCCATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTG40.122737035900583No Hit
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGAAATAAAGCTTTTTGAT40.122737035900583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)