FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002881528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002881528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74007
Sequences flagged as poor quality0
Sequence length71
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6120.8269488021403381No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2790.3769913656816247No Hit
ATGTATATTAATGTAAAACAATGTTAATTTACTCAAGTTTTCAGTTTGTACCGCCTGGTATGTCTGTGTAA1400.1891712946072669No Hit
TCTAAGAATTGTATATCCAACAAAGTTATCCTTCAAATATGAAGGAGAGATACATTCTTTCCCAGACAGAA1150.15539070628454066No Hit
GATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACG1050.14187847095545014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)