FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1141
Sequences flagged as poor quality0
Sequence length66
%GC28

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40635.58282208588957No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG242.1034180543382996No Hit
CTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGT121.0517090271691498No Hit
GCCAGGAAGTTCAGGGGAGGGTGCCGGGTCCTTCCCGGGCCTGGCGTGTCGGAGCCACCCAGGTCC40.35056967572305No Hit
CCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGTGGCCAAGGATGCT40.35056967572305No Hit
AATGTGTGGAGATGGCGACTAGTGGACAACAGAACAATATTGGAATGGTGGTAATACGAGGAAATA40.35056967572305No Hit
CGACGCGGGGAGAGAAAAAGGAAGATGAGGAAAAGGAGAAAAAATAAAAGGAGGAAGACAGAGGGA40.35056967572305No Hit
CGGGTGGGGAGGTGGCCAAGGATGCTGGAGCTGAATCAGACGCTGACAGTTCTTCAGGCATTTCTA30.26292725679228746No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC30.26292725679228746No Hit
CAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGTGGCCA30.26292725679228746No Hit
GCTACATGTGTAAGTCTGCCTAAATAGGTAGCTTAAACTTATGTCAAAATGTCTGCAGCAGTTTGT30.26292725679228746No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.26292725679228746No Hit
GGCCTTATTGTATCGGTTTTATATTACCTGTTCTGCTTCACTAGGAGATCATGCTGCTGTGATACT30.26292725679228746No Hit
GTGTAAAGGTTTCATGTTCACTGTGAGTGAAAATTTTTACATTCATCAATATCCCTCTTGTAAGTC30.26292725679228746No Hit
CTTCTATGTGGTGCTGGGTAGGCCAGGTTTCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCAT20.175284837861525No Hit
GCATATGTGGGGCGCCTCAGCGCCCGGCCCAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTG20.175284837861525No Hit
GCTGGGGAAGGCGGGGCTAGGCATCACTGACACACGCAGACTCCGTGGTTGAGGCATTTTATTGGA20.175284837861525No Hit
GTAATCTGCTTTGTTAATGAAAATGATAAAACAGAATATTGACAAGCTAGGACACCTGTGGTATCT20.175284837861525No Hit
CTGTCAGGGTGTCCCCCATGCCTGGAAGAGGAGCTGGTGGCTGCCAGCCCTGGGGCCCGGCACAGG20.175284837861525No Hit
ACCTACTCATGCACCTAATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTACAC20.175284837861525No Hit
GTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCC20.175284837861525No Hit
ACTTCATATTTGGGTAGGTTAAGCTGCCATACGTGTTCAGTGTGAATAGTGTTTAAGTTGAAAATA20.175284837861525No Hit
GGTAAAAGTTATTAAGTGTGCAAATTCCAAAACCAAAAAAAATGTCATTGCTACAGAGAACTGTAT20.175284837861525No Hit
CTGGAGCTGAATCAGACGCTGACAGTTCTTCAGGCATTTCTATTTCACAATCGAATTGAACACATT20.175284837861525No Hit
CTAAATGTCTTAAGAACCTAATTAAATAACTAACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.175284837861525No Hit
CCTGTCGTGGGCTCATTGTGACCACTGGCCTCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGA20.175284837861525No Hit
GATCAGAGTCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.175284837861525No Hit
TTCTACATCACGACAATCTCATCATATTATTTCTATAACTTTTCAAGGACTTGCGATGGATGGTTA20.175284837861525No Hit
GCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGTGGCCAAGGATGC20.175284837861525No Hit
GGGTCCCAAGCTGGACCATTCTTTAGAGTTCAGCTTCTTGGATCTGGGTCATGTTATCAGGTAACC20.175284837861525No Hit
GTACCGCCTGCAGTGTCGCCATGACTGATCATGGCTCTTGCATTTTTGGGTAAATGGAGACTTCCG20.175284837861525No Hit
CTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.175284837861525No Hit
GTCGTGGGCTCATTGTGACCACTGGCCTCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACC20.175284837861525No Hit
GTCTCAGTGTTGGTGTTTTCCTCCCTAAAACTAACATTAGGGCTGTGCCACGGGCATGACTTTATT20.175284837861525No Hit
ATTGTGACCACTGGCCTCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGA20.175284837861525No Hit
TTTCTATTTCACAATCGAATTGAACACATTGGCCAAATAAAGTTGAAATTTTACCACCAAAAAAAA20.175284837861525No Hit
TCCTTGAGTAGTTTTTATCTGAAATCAATTAAAAGTGTATTTGTTACTTTAAAAAAAAAAAAAAAA20.175284837861525No Hit
GGCCAGGCCTCCTCGGAGAAGCTTGTCCCGCGTGTGGGAGGGACGGAGCCGGACTGGACATGGTCA20.175284837861525No Hit
GGCCAGGCCTCCTCGGAGAAGCTTGTCCCCCGTGTGGGAGGGACGGAGCCGGACTGGACATGGTCA20.175284837861525No Hit
GGGGTGGAGAGCAGAGCGCGGCGGCTGGAAGCTGCTAAGTCAGAGCCGCGATGTTCCGGATTGAGG20.175284837861525No Hit
ATGGAGACTTCCGGATCCTGTCAGGGTGTCCCCCATGCCTGGAAGAGGAGCTGGTGGCTGCCAGCC20.175284837861525No Hit
TATGATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAAAAAAAAAAAAAA20.175284837861525No Hit
ACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGCCTCAAGCTCCGGGGAAAGGACATTGGAAAGC20.175284837861525No Hit
AAAGAAAGAGAGGGTGGGTTTAAGGGTAGTGAGGGACACTTTGTGAAGAAATGACAGCTTGTGAGG20.175284837861525No Hit
GTTCAAGGCAGAACCACGACCCTTGACTCCCGGGTGGGGAGGTGGCCAAGGATGCTGGAGCTGAAT20.175284837861525No Hit
GTTATAGTCTTAAGATTTGTTTTCTAAAGTTGATACTGTGAGTTATTTTTGTGAACATCCTGATGT20.175284837861525No Hit
TCCCTACACGACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.175284837861525No Hit
GGTAAAGGCAGACCGAGATGAATCCTCACCATATGCTGCTATGTTGGCTGCCCAGGATGTGGCCCA20.175284837861525No Hit
GGCGTAGGGATGGCTTCAGGGACCGCGGCGTTGGGACTGGAAGGCTCAGGGGCAGGCGGTGAGGCC20.175284837861525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)