FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3109
Sequences flagged as poor quality0
Sequence length66
%GC18

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA142845.931167577999354No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG220.7076230299131554No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC90.2894821486008363No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.2251527822450949No Hit
CTTTGATAAAGTTTTTCATGCACAGGCAAAATGTATTCACTAGATTTCTACGTAGTGATCTGCTTT50.16082341588935348No Hit
GTAGCTGTGGAGGAAGATGCAGAGTCAGAAGATGAAGAGGAGGAGGATGTGAAACTCTTAAGTATA50.16082341588935348No Hit
ACGCGGGTTAGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.1286587327114828No Hit
CATCCGCAGAGATGCCCCTGCTGGCCGCAAAGTGGGTCTCATTGCTGCCCGCCGGACTGGACGTCT40.1286587327114828No Hit
GCCTAACTCATATAGTTTTCAAAATGACCTTATGCAGGACGTACCATTATTATGCTCACTTTACAC40.1286587327114828No Hit
ACATTGAGATGATCCTTACGGAAAAGGAACAGATTGTTCCTAAACCAGAAGAGGAGGTTGCCCAGA40.1286587327114828No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC40.1286587327114828No Hit
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.1286587327114828No Hit
CCTGAGTTATTTGAAATGATTTTTTTTGTACATTTTGGCTGCAGTATTGGTGGTAGAATATACTAT40.1286587327114828No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)