FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2558
Sequences flagged as poor quality0
Sequence length66
%GC17

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA122948.04534792806881No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA140.547302580140735No Hit
GTGAAACCCTGTCTCTACCAAAAGTACAAAAAATTAGCCAGGCACCATGGCACACACCTGTAGTCC60.23455824863174357No Hit
GAGTTAACATTTGGCTATACTGATGTTTGTGTTACTCAAAAAAACTACTGGATGCAAACTGTTATG50.1954652071931196No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAA50.1954652071931196No Hit
CCCTTAGCCTTGCTGTAGAGACTTCCGTCACCCTTGGTAGAGTTTATTTTTTTGATGGCTAAGATA50.1954652071931196No Hit
GGAGTGGATAACTTGGCCCTGGAACCCTGACCCTGTGTCTCCTGCCCGGTGGCAGTAACAAAGCCT50.1954652071931196No Hit
CCTCCTGAGTAGCTGGGATTACAGGCACATGCCTGTAATCCCAGCTACTCGGAAGGCTGAGGCAGG40.1563721657544957No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1563721657544957No Hit
AATTAATCGTTCTGCACTTCAGCTTCCTTGTCTATCAAATAAAAAGAATAGTACCTGCCCAAAAAA40.1563721657544957No Hit
CCCCTATCCCCTATCCTTCATCTCTCTGTCACTGTTGCTCACTCGCTCTCTCACTCTCATGTGTGT30.11727912431587179No Hit
TTTCATTACAGATTCCTTGATTGGTAAGCTCTCCAAATGATGAGTTCTAGTAAACTCTGATTTTTG30.11727912431587179No Hit
TTCCCTACACGACGCGGGAGACCTACTGAATTGAATTATGCATTTTAATAAGATTCCCAGGAGGTT30.11727912431587179No Hit
CTCTGAGCTCTGCATTTGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCTTAG30.11727912431587179No Hit
AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.11727912431587179No Hit
GACACTAAGGAAATGCTGAAGCTTTTGGACTTCGGCAGTCTGTCCAACCTTCAGGTCACTCAGCCT30.11727912431587179No Hit
GCGGGGGATCTATTTCATGTTTTTGATCAAAAACTATTTGGGATATGTATGGGTAGGGTAAATCAG30.11727912431587179No Hit
GGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.11727912431587179No Hit
GGAGTATCACTTGAACCCAGGAGGAAGAGGTTGTGGTGAGCTGAGATCGCATCACTGCACTTCAGC30.11727912431587179No Hit
GGGCATGGTGGTGCGCACCTGTAATCCCAGCTACCTGAGAGGCTGAGGCAGAATTGCCTGAACCCG30.11727912431587179No Hit
CCTTTCTTAGCTGATGTCTTTGGCCAGAACACCGTGGGCTGTTACTTGCTTTGAGTTGGAAGCGGT30.11727912431587179No Hit
GAGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGCAAAGGCAAATAAATCCTTGTTTTGTCTTCA30.11727912431587179No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)