FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5905
Sequences flagged as poor quality0
Sequence length66
%GC21

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA225138.12023708721423No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG240.40643522438611346No Hit
GGTCATGCTGTTGGTGATATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTTTCTCTT150.2540220152413209No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA140.23708721422523285No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC140.23708721422523285No Hit
TTTTTACTGAGGTATAATGTGCATCAAGTCCAAAAATCTTAAGTGTGCATCTTCCTGAATTTTTAC130.22015241320914478No Hit
GATTTATACAGACATCATTGTGTTGTATTTTAAGGAAAAATTTCCATTTACAATTTCACATTAACT90.15241320914479256No Hit
ATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTA70.11854360711261643No Hit
AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.11854360711261643No Hit
GTTTTAAGTTATTAGTTTTTAAAATCAGTACTTTTTAATGGAAACAACTTGACCAAAAATTTGTCA60.10160880609652836No Hit
GTGTACTGGCCACATATGGAAGCATTGCATTGATTGTCTTATATTTCAAGTTAAGGTCCAAAAAAA60.10160880609652836No Hit
GTATCTATATATGTATGTTATTTAGAAATAAGAAAGAAAATACTAGAGGAAATAACTAAAAAGATT60.10160880609652836No Hit
TTATTACCATACGGAACTGTGGATGGAACAAGCCCTAAGGCAACTGGATGAAGGCGAGATTTCTAC60.10160880609652836No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)