FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8060
Sequences flagged as poor quality0
Sequence length66
%GC25

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA278734.57816377171216No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG460.5707196029776676No Hit
GCCCAGATATGGAGAGGTTAGGTAATGTGGCCATAGTGGGCGTGGGATGAGACATCATCAGTTCAC250.3101736972704715No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA220.2729528535980149No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC150.18610421836228289No Hit
GGTTAGGTAATGTGGCCATAGTGGGCGTGGGATGAGACATCATCAGTTCACGCCAACACCCGTGGC110.13647642679900746No Hit
GATATGGAGAGGTTAGGTAATGTGGCCATAGTGGGCGTGGGATGAGACATCATCAGTTCACGCCAA110.13647642679900746No Hit
GTGTTAAGTGATTTTAAAAAATAATAACCTGTTTTCTGACTAGTTTAAAGATGGATTTGAAAATGG90.11166253101736973No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC90.11166253101736973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)