FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2347
Sequences flagged as poor quality0
Sequence length66
%GC21

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA95940.86067319982957No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG140.5965061780997017No Hit
GGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTA90.3834682573498083No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.2982530890498509No Hit
GCCCAGAACCAGGCTTGCCACACAGTCCCCGCCTGCCATGGCCGGCTCTTCCTGGAGTGTTGCTTG60.2556455048998722No Hit
GACCAAATGTTTTTCCATCTGTGTACAGCTCCAGCTGTTTGAAGAGAGGGAACAACACGGTTTAGA60.2556455048998722No Hit
GGTCAGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCCCGTAGCTACTAAAAACATAAAAAA50.21303792074989347No Hit
GACTCCGGCAGCTTTATCGCCAGAGTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGAT40.17043033659991477No Hit
GGCTAAGGCAGGAGGATTGCTTGAACCTATGAGTTCAAGGCTGCAGTGAGCCATGACTGCACCACT40.17043033659991477No Hit
GAGAAAGCCAAGATCCACTACCGGAAGAAGAAACAGCTCATGAGGCTACGGAAACAGGCCGAGAAG40.17043033659991477No Hit
GTTTGGCATGTGCAGAACACCTGGATATCCCATTCCTCTTAATGTTCCTTTTTAGCTCTTTTTCTT40.17043033659991477No Hit
GTGCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGGTCTACATCAACTATTACGACAT40.17043033659991477No Hit
GAAATAATAAAAAGAAGAAAGAAGACCAATATAAATACATAAGTATATTGCCATAAAGGAGAGCTT30.1278227524499361No Hit
GAGGTTGCCAGTTATACAATAATCTATTTTGCATATGAAAGTTTGTATTTAACTTTTTTGTTCATT30.1278227524499361No Hit
ACTTTGGGAGGTCAAGGCAGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATG30.1278227524499361No Hit
GATCTGAACTGGCTGCATCTCCCTTTCCTCTGTCCTCCATCCTTCTCCCAGGATGGTGAAGGGGGA30.1278227524499361No Hit
ACCAGGCAGTGACAGCCACCCTGGAGGAGAAGAGGAAAGAGAAAGCCAAGATCCACTACCGGAAGA30.1278227524499361No Hit
AAAATAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1278227524499361No Hit
CTGCCAAACATACAAAAATTACTGAGCATGGAGGCAGGTGCCTGTAATTCCAGCTACTCGGGAGGC30.1278227524499361No Hit
TGTCAACAGTATTGTGAAGTGATCATTTCTTGTAAAACTTGTAAATAAACTATCATCTTTGTAGAT30.1278227524499361No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAA30.1278227524499361No Hit
GCCAACATGGTGAAACCCCATCTACTAAAAATACCAAAAAAATTAGCCAGGCGTGGTGGCAGGCGC30.1278227524499361No Hit
ACATGAAAGGAAAGGGTGCCTCATCCCAGCAACCTGTCCTTGTGGGTGATGATCACTGTGCTGCTT30.1278227524499361No Hit
GCTCCCTGGAGCCCTGTTGGCAGCTCTAGCTTTGCAGTCGTGTAATTGGCCCAAGTCATTGTTTTT30.1278227524499361No Hit
TCCCTACACGACGCGGGATAGTTTGATATAGTGGTAATTATTGATGTATACCTTTTTTCTACCAAC30.1278227524499361No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG30.1278227524499361No Hit
TGTTTTTATTGGATTTAATTTCCCAAACACTGACATTTTAGACAATTTTGCAAGGACTCTGAATTT30.1278227524499361No Hit
GCTTGAACCCAGGAGCAGAGGTTGCAGTGAGCCGAGATAGCACCACTGCACTCCAGCCTGGGTGAC30.1278227524499361No Hit
TCCCTACACGACGCGGGAGAGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGAG30.1278227524499361No Hit
GAGTGAGCTGAGATCGCAACACTTCCCTCCAGCCTTGGTGACAGAGTGAGACTCTTGTCTCAAAAA30.1278227524499361No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)