FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882149

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882149
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3465
Sequences flagged as poor quality0
Sequence length71
%GC31

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA59817.258297258297258No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG260.7503607503607503No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG200.5772005772005772No Hit
GAATAAAGTGTAACAATTGTGTAGCCTTTTTGTATAAAATAGACAAATAGAAAATGGTCCAATTAGTTTCC200.5772005772005772No Hit
GCTGATGGCCAGACTCTGTTTGCTGGCTACACGGACAACCTGGTGCGAGTGTGGCAGGTGACCATTGGCAC190.5483405483405484No Hit
GACTTGATCTTTTTAATGTCCAAAATCCATTTCTTATTGATCTTTAAAGATGTGCTAAATGACTTTTTTGG180.5194805194805194No Hit
GGTTGTAAATTCATACACTTATCACATGAATGTGTTACTGTATACAAAACTCTTAATGCTTTATTCTCAAA180.5194805194805194No Hit
GAAAGAAACAGAAAAACATTAAACACAGTGGGAATATCACTTTTGATGAGATTGTCAACATTGCTCGACAG170.4906204906204906No Hit
GGTTTCTACATGGAAGACTAAACTCATGCTTATTGCTAAATGTGGTCTTTGCCAACTAAATTTAAGATGCA160.46176046176046176No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT160.46176046176046176No Hit
ATTTTAGAGAGATACCTTCACATGTGCTATCGAAAGTATGCATGTATTTTACGTACAAGGTTCGCTACACT140.40404040404040403No Hit
GGCGAAAGGAAGCAGAGGAGGTGGCTAAGCTGAGAGTCAGTCTAATTGATATGTTGGGGCTAATTATCTAC140.40404040404040403No Hit
GTCTTTCAACATGCATCCAAAACAGTGTTCAATTTAACGTGGCAAAGGGCAACATTTAACATAATTCAACT130.37518037518037517No Hit
TGTACAGAAACCTGTGATATTTATACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCT110.31746031746031744No Hit
CCTTACAGGTTATTAAATGAAACTAGAATTAACAAACATGCCAAAATGTTTCACTTTTAATAGTAGACACA110.31746031746031744No Hit
GTGTTAGCTGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTT110.31746031746031744No Hit
ACCTACACAGAAGGCTGAGGCAGGAGGCTGAGGTGGAAGAATAATTTGACCACAGAAAATCAAGGCTGTAG100.2886002886002886No Hit
GGACTTCTATGTGGTGCTGGGTAGGCCAGGTTTCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTG100.2886002886002886No Hit
ATTGAGTAATGGTGTAGAACACTAATTAATTCATAATCACTCTAATTAATTGTAATCTGAATAAAGTGTAA100.2886002886002886No Hit
GTTTTGGATGCATGTTGAAAGACATGCTTTTATTTTTTTGTAAAACAATATAGGAGCTGTGTCTACTATTA100.2886002886002886No Hit
TTCTTTTCCCGAGAGGCAGACAATGTTAAAGACAAACTTTGCAGTAAGCGAACAGATCTTTGTGACCATGC100.2886002886002886No Hit
CCCAAGCCAGAGTCAAGGTCTGACGCCACCTCAAGGTGACAGCTCATCTCCAGCACAGCACAGGCGTGTGC100.2886002886002886No Hit
GTTACATGTTTTGTGTATTTCACAATGTCGTGCTAAATAAATGTATGTTACATTTTTTTCCCACCAAAAAT100.2886002886002886No Hit
AGTTAAAGTTAAAAAAAATTTTTTTTAAAGATTTGGGGAGGCAAACAGTTAATGCCAAATAAATGCGTGCT100.2886002886002886No Hit
GTTTTGTTCCCGTTCAGATTTCTCTCGCCTTCCAATAAAAACTTCCCTGTCCTGTGAAAAAAAAAAAAAAA90.2597402597402597No Hit
CATCATTTCTTTTTGGGAGAGACTTGTTTTGGATGCCCCCTAATCCCCTTCTCCCCTGCACTGTAAAATGT90.2597402597402597No Hit
CATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATT90.2597402597402597No Hit
ACTACTACCTCTTTATTCAATGGATGGCAGGGTTTGTCCTGTTCTAATCAGAGTAAGCCAGATGTATTTAC90.2597402597402597No Hit
GTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAAT90.2597402597402597No Hit
ATTACAGAGCATTCCTTCTGAGGAGGAGATTTTTGCACCTGAAAAAGGCAGCCATAGTTTTCCAGAAGCAA90.2597402597402597No Hit
CCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGC90.2597402597402597No Hit
GCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGCAAGAAAAA80.23088023088023088No Hit
AGTGCATTTATTGTCTTTCCACATATTGGAGGAATGTCATCTTCCTAAATGAAGTTTATTTGGAGGAACAC80.23088023088023088No Hit
TGGATCTATTTCATGTTTTTGATCAAAAACTATTTGGGATATGTATGGGTAGGGTAAATCAGTAAGAGGTG80.23088023088023088No Hit
GTACCTGTCTGTTTCCTGTCCTCCTTCCAGTTACATCTGTCCATGTCTGGACTCGGCTGGCCGTTCCCTCC80.23088023088023088No Hit
TTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGGTTGAAGTGTAGGGAGATGCTTGCTGCAGCTCTTCG80.23088023088023088No Hit
GAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGCTGTTAATTCTTCAGTCATGGCATTCGCAGTGC80.23088023088023088No Hit
GCACGCCTTTACCCGCTGCTTCCACGCCTGGAGCGCCTTCTGCAAGGCCCTGGCCTAAGACAGGCTGGCAC80.23088023088023088No Hit
GGCCGAGGCGGGCAGATCACGAAGTCAGGAGATCGAGACCATCCTGGCTAATACGGTGAAACCCCATCTCT70.20202020202020202No Hit
GAATATAATGGAGTCGAATGAAATGGAATTGAAAGGAATGGGATCGAATACAATGGAATATACTGGAATGT70.20202020202020202No Hit
GTTTATAGCCATGATCAGATGTGGTCAGACTCTTTCTGGGCCTGGAGACCACGGTCACTTGTTGACTGTCT70.20202020202020202No Hit
GATTCGGGAGGTGTGTGGCTTTGCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAGGTCTCCAAGGACA70.20202020202020202No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.20202020202020202No Hit
GTCACAGTGCCTGATCCGGAGAAAAACATTTTCATATTTCAAGTGTTTATCTCTTCAGCATTTGAGTGCTC70.20202020202020202No Hit
GTTTCTAATTATTAGCCATTGCAAACCATGTTATGTGGTATATTCCTGCACTTGTATTCTTCTGCATGTGT70.20202020202020202No Hit
CATCTACAACCTTCGATCTCCTGACGAGTTTATTGTTGGCCAAAACCAGGCTTTGATTGAACCAGGATGAA70.20202020202020202No Hit
GATCTCAGCTTTGAGAAGCCTTCAGCTCCAGGGAATCCAAGCCTCCACAGCGAGGGCAGCTGCTATTTATT70.20202020202020202No Hit
GCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGAGGCGAGCCACCGCCCGT70.20202020202020202No Hit
ATACCAATACTTAGGATTTTGGTCTTGGTGTTTGTATGAAATTCTGAGGCCTTGATTTAAATCTTTCATTG70.20202020202020202No Hit
CAAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAATACAAAAATTTAGCCAGGCATGGTTGC60.17316017316017315No Hit
TGGAGTTTGGGGGGACATCCCGCCTCAGGCATCCTTCTCAAGGGGAAGCCAAGAGAGGCATCAGGATGGGT60.17316017316017315No Hit
CACATGAAGTATTTCCATGGAATGGAGAAGTCACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCA60.17316017316017315No Hit
GGCTATAGGTTTACTTAAAAGGAATAAATTTGGAATGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.17316017316017315No Hit
CGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTG60.17316017316017315No Hit
CACTGTGGAACGTCTGTAAATATGTTTTTATAATTCCATGTATAGTTGGTGTACACTCAAAACCTGTCCCC60.17316017316017315No Hit
GTTACATCCTAGATGAGTATTGTATTCAAAAATACTGGGCCTTAAGTCTTCATAACAATCCTGATTTCCAC60.17316017316017315No Hit
GCCTAGAGGTAACCAATAAAGTATTAGGGAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.17316017316017315No Hit
GTGTGTTCTGATTAGAAATGACCAATATTATACTAAGAAAAGATACGACTTTATTTTCTGGTAGATAGAAA60.17316017316017315No Hit
AAGAAGTACACATAAGTTATTTCCTAGGATTTTTCCCCCTGTGAACAGGCATGTTGTATTATATAACATAT60.17316017316017315No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA50.1443001443001443No Hit
GGGTGATCAGCCCCAGATTTGACGTGCAACTCAAAGACCTGGAAAAATGGCAGAATAATCTGCTTCCATCC50.1443001443001443No Hit
CATTTCCAAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGTTAAATTTGTAAACAATC50.1443001443001443No Hit
GGCTCGGAGGACCCTGGAAAACAGACGGGTCTGAGACTGAAATTGTTTTACCAGCTCCCAGGGTGGACTTC50.1443001443001443No Hit
GTTTTGGACAGTTTACCAGTTGCCTTTTATCCCAAAGTTGTTGTAACCTGCTGTGATACGATGCTTCAAGA50.1443001443001443No Hit
GTGTTATTCTGCATATTGCAGTTCTTGTCAATGACCTGGTATAGCCTGTCGTACATCCCATATGCAAGGGA50.1443001443001443No Hit
ACCGCAGCCTGCTCGAGGGACAGGAAGATCACTACAACAATTTGTCTGCCTCCAAGGTCCTCTGAGGCAGC50.1443001443001443No Hit
CACTCCAGCCTGGGTGACAGAGGGAGACTCCATCTCAAAAAAAATAAAAATAAAAATGTATCACAACGTAT50.1443001443001443No Hit
GTTATATACTCCTGGATTATAGATTAAAAGTCTCTGTAGACATCTCTGTGAAGAGCAAGCTATCATTAAAC50.1443001443001443No Hit
AATTAAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCTTTGTAAAATTGACAGAGAGGGGAAAC50.1443001443001443No Hit
CTCCATCCAGCAAGGACACCACAGCTCTTCCGACTCCAGCAGCAGCTCCAGCGATTCGGACACGGATGTGA50.1443001443001443No Hit
CTCCGTTTTCTAGCAAGTATTAAGGGAGCTGTGTCTGAAATGGCACTGTCTTGTCAGTCATTTCTGTTTAC50.1443001443001443No Hit
GCAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCTA50.1443001443001443No Hit
CTCACATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1443001443001443No Hit
GGGACCGAGAGATCAGATAGTTGCTGTTTTGTAAAATGTAATGTATATGTGGTTTTTAGTAAAATAGGGCA50.1443001443001443No Hit
GGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGTTTACCTCAGGAATTGCAATCATGTAAGACTATAT50.1443001443001443No Hit
ATGTACCTCCTGCAGAGACAAATCTTCTGCATGAGATTACTGATGCTTCACTTGCACTCTAAGCTGGAATC50.1443001443001443No Hit
TCTCAGTATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1443001443001443No Hit
GCCAAAGTGACAGGCGGTGCGGCCTCCAAGCTCTCTAAGATCCGAGTCGTCCGGAAATCCATTGCCCGTGT50.1443001443001443No Hit
GAGAAATTCAAAGTTCAAGGTGAAGCTGTCTCAAACATTCAAGAAAACACACAGACTCCAACTGTACAAGA50.1443001443001443No Hit
CCCAAAGTGCTGGGAATATAGGCGTGAGCCAACATATCCAGCCCACAGCTGGCATTTATTGTGCCCTTTCT40.11544011544011544No Hit
GGCATCTCTGGGCTGAGCCTACTGTCTCCTTCCCACTGTCCTTTCTCCAGGCCCTCAGATGGCACATTAGG40.11544011544011544No Hit
CTTTTACCATGTCAAGAAATTATTAAAAATACAGGTACTTTGACCTCTTTCTAAAGCCGCAAAAAAAAAAA40.11544011544011544No Hit
GTGCCACCATGCCTGGCTCAAACACAAAGTTTTTTCATAAAACTCACTTGGCGGCAAAATTCTACCTTACC40.11544011544011544No Hit
CTATCACACCCCATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11544011544011544No Hit
GGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGCCAACTAATATT40.11544011544011544No Hit
GATTAAAGGTCCATTACTTTATTTAAAATAAAATATATTTTAGTTCTTAAAATTTATTCCATAAAGTACAT40.11544011544011544No Hit
ATACTGAGATGTTTATTGCATTTTAAAAATATCCACACTCTTAAATATCCTGTTTCAAATTCCTCCTAAAA40.11544011544011544No Hit
GGTTGTCAGCTTTGGATTGCTGGGGCCAGGCCCCATGGAGGGTATACTGAGGGGTCTATAGGTTTGTGATT40.11544011544011544No Hit
CCATTGGACAGTCTCCCTGATGGACCCTCAGTCTTCTCATGAATAAATTCCTTCAACGCCAAAAAAAAAAA40.11544011544011544No Hit
GGAGACCGGCCTAATAAACATGTGTGGCCTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11544011544011544No Hit
GGCTTCCAGAGAAAACGGCACACCAATCAATAAAGAACTGAGCAGAAACCAACAGTGTGCTTTTAATAAAG40.11544011544011544No Hit
GGAGGGGTAGGACCTTTGCCCTGGGAAGACCTGAAAAAAGAAGCACTGGCTCTAAGAAATAAGGGGGATTG40.11544011544011544No Hit
CTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGG40.11544011544011544No Hit
CTCCATAGGAGATCCTGGCTTTCCAGGGTGGGCAAGGGCAAGGAGCAGGCTTGGAGCCAGGGACCAGTGGG40.11544011544011544No Hit
CTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11544011544011544No Hit
GAATCACTTGAACTCCAGAGGTGGAAGTTGTGGTGAGCTGAGATCGTGACATTGCACTCTAGCCTGGGCAA40.11544011544011544No Hit
GCCTACCTGAGTAGAATCTTATTTATGAACTCCTGTGTATTGCAATGGTATGAATCTGCTCATGTGGAGAC40.11544011544011544No Hit
ATATAAACTGAAGAGCAGGGGAAATACTAAAATGTCCATTCATCTGATCCACATGCGTGTGGCAGCCCAAG40.11544011544011544No Hit
CCTGCAGCCTGGCACCCAATATCATCTCACAGCTCTGAGGCCCTGGGCCAGATTACTTCCTTCACCCCTCC40.11544011544011544No Hit
AAATTGACAAAGTTTTTAACAACATTGGAGCAGACCTTCTGACTGGCAGTGAGTCCGAAAATAAAGAGGAC40.11544011544011544No Hit
GGGGAAAGGCAGTGCCCTCTCTGGGCAGTCAGATCCACCCAGTGCTTAATAGCAGGGAAGAAGGTACTTCA40.11544011544011544No Hit
GGTTTGGAACCCCAGAGGGAGAGTTTGTGTCCATGGGTGTTATCTCTGATGGCAACTCCTATGGTGTTCCT40.11544011544011544No Hit
CGAGTGGAAGAAGTGAGAGATGCTGGCCTGCGCCTGCACCTGCGCCTGGCTCTGTCACCGCCATGCAACTC40.11544011544011544No Hit
TGATCCTATACAGAAACTCTTTGTGGACAAGATTAGAGAATACAAATCTAAGCGACAGACATCTGGAGGAC40.11544011544011544No Hit
ATATAATACATATTCACAAAATTTACACAGCTCATGCATACCATAACTTATACAGAGAACAGTTTAGCAGT40.11544011544011544No Hit
TGGCTGGAAGTACCAGGCAGTGACAGCCACCCTGGAGGAGAAGAGGAAAGAGAAAGCCAAGATCCACTACC40.11544011544011544No Hit
ACGCGGGCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11544011544011544No Hit
GCCCGTATTTACCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11544011544011544No Hit
TTCCTACACGACGCGGGATGTGTGCTGGTGAATGTGAGTACAGGGAAGCAGCGGCCGCCATTTCAGGGAGC40.11544011544011544No Hit
GGGGCTGCAGAACAAATCAAGCACATCCTTGCTAATTTCAAAAACTACCAGTTCTTTATTGGTGAAAACAT40.11544011544011544No Hit
CCTTCGATGCATTCCAGCCTTGGACTCATTGACTCCAGCTAATGAAGATCAAAAAATTGGTATAGAAATTA40.11544011544011544No Hit
GTGCTCTACAATAAAAACCAAATCTAATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.11544011544011544No Hit

[OK]Adapter Content

Adapter graph