FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2294
Sequences flagged as poor quality0
Sequence length71
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA45619.87794245858762No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAG281.2205754141238012No Hit
TGTACCCCTATTAACAGAAAAATCTGGTTATTAGCATTGGCATTAACAAAGTCCTCATGCATCATGCTTGA180.7846556233653008No Hit
ACATCTCAGTAATCATCACAGACTGTGTGTTCAGCAGTTTAAATGTGACTCCTATAAACTAATTACTTTCA150.6538796861377506No Hit
CATTTTAGAAGCTTGTGAACACATGACGTCAGATCAAAGAAAACAGATCTTCTCCAGATTGGCAGAAAGTT150.6538796861377506No Hit
GGAATGCTGATTTTTTTTAAAGTAGGAATTAAAGTCATACACAAAATGTGGTAATTCATATGTAGATGAAA120.5231037489102005No Hit
AAGTTTACTTCTAATCATGTCCCTCTCAATTTTATTTCCCGCAGTCCAGGAGTGTTATGTTTTGCCACTAT110.4795117698343505No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCT110.4795117698343505No Hit
GCAGCTCTTCTCCTATGCCATTCTTGGCTTTGCCCTGTCTGAGGCCATGGGGCTTTTCTGTTTGATGGTCG110.4795117698343505No Hit
GGTTTGTGTTTTACTCTTGCTAGTGAGAAAAGTGGGACAAAATATACTTTTGAAATAAAATGCTATATGGC110.4795117698343505No Hit
GGTGGATGTTTACCGTGTGTTATATAACTTCCTGGCTCCTTCACTGAACATGCCTAGTCCAACATTTTTTC100.4359197907585004No Hit
CACATTATTTTCATAAAGTTGCTGGCCAGCTTTTACCTCTTGCATATAATCTGTTGAAGAGGAATCTGTTT100.4359197907585004No Hit
GTATTGGTGAAAGATCAGTAGACAGAATAGAGTCCAGAAATAGACCATGCATATGTAGTCAATTGAATTTT90.3923278116826504No Hit
CATTTTAAATAGTGTTAAGCGACTTGGGATCTCTGGCCCTTTGCGTTTCAGTATTTGTCCTTTTTATGCCT80.34873583260680036No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.34873583260680036No Hit
GGTCATCACCCAGCCTCTGAGAGCAGTTACTGGGGTCACCCAACCTGACTTCCTCTGCCACTCCCCGCTGT80.34873583260680036No Hit
GGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTGGTGGCAGGGCATGAGGACAGCAATGGTTGTATCA70.3051438535309503No Hit
GGGAGGAGGCAACTACATTGAATATCAGAATCTTGTTGACTACATAAAGGGGAAACAAGGCAAACACATTT70.3051438535309503No Hit
AGACACGCCATAGGCTAGACAAAAATATTTGCAACAGACATAACAAAGGGTTTGTTTCTAGAATTTATAAA70.3051438535309503No Hit
TATTTACCCTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.3051438535309503No Hit
GTTCAGCATTTGTATTTTTATTCTGGTATCTAATCAGATTCCTAATCATAGCCCGTAAGAAGGAATGTTAC70.3051438535309503No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAA60.26155187445510025No Hit
CCTTCCTGACTACCTGTGCCCAGAGTGCCCCTACATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTA60.26155187445510025No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCACCCACCACATTAACAACATAAA60.26155187445510025No Hit
CTTTCCTACACGACGCGGGGGCTATACTGTTAGAGAATGATCTTTCCACTGAAAACAAGCTAAAAGTGTTA60.26155187445510025No Hit
ATGTAATAAAAATGCACAACATAAAATGTTTATGATCCCAGCAATACACTTTTTAAAAAATGTGAAAGTCA60.26155187445510025No Hit
ACATAATGAAGAAATTGAAGATTCTCTACATGTCTAATAACCTGGTAAAAGACTGGGCTGAGTTTGTGAAG60.26155187445510025No Hit
GAAACATACAGAGGATGCCTTTTCTGTGATTGGGTGGGATTTTTTCCCTTTTTATGTGGGATATAGTAGTT60.26155187445510025No Hit
CTCTGCAAACTTGATAGGAGAGTAAAAGCCACAATAGAGCAGTTTATGAAGATCTTGGAGGAGATTGACAC60.26155187445510025No Hit
GGGCAATGAAGCGAGACTCCATCTCAAAAAACAAAAAAACAAGAAAGCAAAAAAAAAAGTTATGTGGTGCA60.26155187445510025No Hit
ACATCAGAACTAGAAGAACTAGAGGAGCAAGAGCAAGCTCACCCCAAAACTAACAGAAAACAGGAAACAAC60.26155187445510025No Hit
CTCCGGGGTCCTGTGAGCTGCCGTCGGGTGAGCACGTTTCCCCCAAACCCTGGACTGACTGCTTTAAGGTC60.26155187445510025No Hit
GATTGGAAGAGTGACCTGGCATCTTGGAAATCATTGTGTGTCTTCAGGAGAATGTGCAGTGTCTTGTAACA60.26155187445510025No Hit
CCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.26155187445510025No Hit
CGACATGCACTTCAAGCGCTATCACGACCCCAACTTCGTCCCTGCGGCTTTTGTCTGTTCTAAGTGTGGGA60.26155187445510025No Hit
GTATTGCTTTCTACAAATAATTGCCCCCTTTGTTTTAAAAAGAAGAAATGCATATTGAAGTAGTTTGATGA60.26155187445510025No Hit
GGCGTGGTGGCATGCACCTGTAGTCCCAACTACTCGGGAGGCTGAGGCAGGAGAATGGCCTGAACCCAGGA50.2179598953792502No Hit
CTACCTCTGTTACCGTTTTAGCAGCAGAATTATTAAGGGAAGCAGAATCTTTAATTGCAAAAAAGATTCAT50.2179598953792502No Hit
ACTCCAAACCCTCCATTTCCTCTATTCTGGGACCATAGAATGGCCCATTGTTCAGGCTCCTGTGGATGCTG50.2179598953792502No Hit
TCTTTTAACTTGTACTTTATTAAACACATTTTACTGACGCTTTGCTGTATACCAGGTCTATAATCAGAAAG50.2179598953792502No Hit
CACACGATCAGGGAGAATTATCCCTAAACCCGAATTTCCCAGAGCTGATGGCATCGTCCCTGAAACGTGGA50.2179598953792502No Hit
GTTGCTGGCATGTCTTCATTGGCTATATAAAATGTGGCCAAGAAGATAGGCTCTCAGTAAGAAGTCTGATG50.2179598953792502No Hit
AGCTGCACTGTGAACCTGGGCACTCCGCGCCGATGCCACCGGCCTGTGGGTCTCTGAAGGGACCCCCCCCC50.2179598953792502No Hit
AACAAAGCCTGCCTCTCAAGTTCTATTTTCATTCAATATTTGGCCTGAACTTGAAGTTTTGGTGAGGGAGA50.2179598953792502No Hit
GAATAAACACTTGTACTGGGATCAGAATACATGATGGATGAAATTCTTTACATGTTTTAGCAGAATGAATT50.2179598953792502No Hit
GGACGACCTGAAGGTGGAGCTGTCCCAGCTGCGCGTCGCCAAAGTGACAGGCGGTGCGGCCTCCAAGCTCT50.2179598953792502No Hit
GGTAGATAAAGAGGATGAAATTACTGAAAAGAAAGCCAAAAAAGCCAAGATTAAAGTTAAAGTTGAAGAAG50.2179598953792502No Hit
TGCAACCCCTGAGTTCACTTTTTTAAGACAGCTTATTGATATATATAATGTACATACCATACAGTCACCCA50.2179598953792502No Hit
GCCTTGCTCCTGGCTGTGGGGCTGGCACTGTTGGTGCGGAAGCTTCGGGAGAAGCGGCAGACGGAGGGCAC50.2179598953792502No Hit
GGAGTCCTGGCTTCCAGAAACAGGATTGCCAAATTGTCCCTGTGGGGCTAGATTCTTACCAGCTTAAGAAG50.2179598953792502No Hit
CACACAAGTATGAAGTTTCTTTCAGGTGTAAATAATGAAAAATAAATGCCTCATAAATGATAGTACAATGT50.2179598953792502No Hit
GTGTGACTTCATTGAGACACATTACCTGAATGAGCAGGTGAAAGCCATCAAAGAATTGGGTGACCACGTGA50.2179598953792502No Hit
ATGTCTGAAAAACAATGGTAATTGGCAAGAGGCTCTGCAATTCGTTCCCAAGAGAAAACATACTGGTTTTC50.2179598953792502No Hit
CTACATTGACAGATTGAATTTGCCTAATATGATGACTGTTTTTAATATGGATCTGTATGTGTTCTATTCAG40.17436791630340018No Hit
GCCCCAGTGCTTCCAGACCAAGACTTGGGCCACCACTTGTCCAATAAAGTACATCCCAGACGCCACACCTG40.17436791630340018No Hit
GCAGCTATTATGTTAATAACAAGTTGTTTGTATTTTATTTTTGTTTATACCAGTCTTAAAGATCCAGGTTC40.17436791630340018No Hit
AAATTGAACAAAGACTACTAATGACTTTGTTTGAATTATCCACATGAAAATAAAGAGCCATAGTTTCAAAA40.17436791630340018No Hit
CCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.17436791630340018No Hit
GTATAAAAACCAGAAGTTTGGTTTTGGTGGAAAGAAGAAAGGCTCAAAGTGGAACACTCGGGAGAGCTATG40.17436791630340018No Hit
ATGATAAGGTGTTGACTTGTTAAATTAAACCATTTGGAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.17436791630340018No Hit
AACCTGAAGGCTGCGCAGGAGGAGTATGTCAAGCGAGCCCTGGCCAACAGCCTTGCCTGTCAAGGAAAGTA40.17436791630340018No Hit
GCATACCCCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTAGC40.17436791630340018No Hit
TTATTCTTTTAGTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.17436791630340018No Hit
GGGGACCTGCCCCCTCCTCAGGCATCTGGGAGGGCCCTGCCCCCATGGGCTTTACCCTTCCCTGCGGGCTC40.17436791630340018No Hit
AATAAAAGGTTTACTTGTCTGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.17436791630340018No Hit
GCCATTTATGCCTACGGCAGCAGAAAGAGATGAAATCTTGAGAGCAGTGGGAAATATGCCCTATTGAATGT40.17436791630340018No Hit
ATCTAAGAGTTACCTGGCTACAGAAAGAAGATGCCAGATGACACTTAAGACCTACTTGTGATATTTAAATG40.17436791630340018No Hit
GTTCTGTGGAAAGTGTAAAGCATTCCAACAAAGGGTTTTAATGTAGATTTTTTTTTGCACCCATGCTTTGA40.17436791630340018No Hit
AGCTGGAGGAGGAAGGGGAGTTTGACTAAAGTTCTTTTTGTTTGTTTCAAATTTTCATTAATGTATATAGT40.17436791630340018No Hit
ATACATATACTCAGTTCCTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.17436791630340018No Hit
ACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
AAGTAAGGCCTTAGCTGAAGCTTCATCTTCCTTCTGAGCATTAAAGGTGCAAGAGCAATATACACTCAGAA30.13077593722755013No Hit
GTTTATTTTTTCTTGTATCATTTTTTAGAAATTCAGCATAATATTTGGTGAAGAACATAAAGAAAGCAGTT30.13077593722755013No Hit
TTCTAGGCCCGCCCACCCCAACCTTCTGGTGGGGAGAAATAAACGGTTTAGAGACTAAAAAAAAAAAAAAA30.13077593722755013No Hit
GTCAAATCCCTTCTCGTCCCCATGGATGACCCCCCTCAGATAGGGGTCCCTTGACCACCATCCTCCGTGAA30.13077593722755013No Hit
GTTTCAGCATCAGGCAAGTGGCTGGATGGTATTCGAAAATGGTATTACAATGCTGCAGGATTCAATAAACT30.13077593722755013No Hit
CTCCCCACCTTATTCCATTCTTAACTCTGCATTCTGGCTTCTGTATGTAGTATTTTAAAATGAGTTAAAAT30.13077593722755013No Hit
GTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAA30.13077593722755013No Hit
ATTATAGGCAAGCGGGGCATCATTGGCTATGATGTTTGAAGACCAATCTTTAACATCTGATTATATTTGAT30.13077593722755013No Hit
ATTTTGTATGCTGTATTTTCCAAGACGTATATTATTTTACTATTAAAGAAAAAAATCATTTTTTAAAAAAA30.13077593722755013No Hit
GGCTCATTCCAGAACCTCTGCTGCTGTCTATGTCCAGGAGTGCAGAAGGCCTTAAACATACAACTCAAGCT30.13077593722755013No Hit
GACCCCCGAAACCAGACGAGCTACCTAAGAACAGCTAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGG30.13077593722755013No Hit
GTATTTCAATTTGTAAGAAATTTGCATGTACTGTGAGCTCCCCAACGTCAGGAGACTGACCCTTTTGATAT30.13077593722755013No Hit
CTTCCAAAATGGCCTTTATCATTTCTCCAGTCTGTCACCCTCCTTTCCTGCTCCCATACACCCAAGGCTTG30.13077593722755013No Hit
CTATAGCACCCCCTCTACCCCCTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
TCTGCACTCAGACAGTTTACAGAAATAAATGTTTTTTTTGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GAAATTTTTCCTTTGGGGAAAAAAATGAATATGAACATTTCCATTGTGTTAAGTGTAAAAAGGTCCAGACA30.13077593722755013No Hit
ACAATGTATAGTTCCTCTAGTACGTAAACTCATTTTTTTTCTCAGAGAGCCAAGTAGAGACACAGGCAGTT30.13077593722755013No Hit
GGCTGGGGTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GTTCCACCACTTGTACACTTACCAATGATTTAAAGGGTTTATTATACATCTAGTTTTATTATACTTTGTAC30.13077593722755013No Hit
GAATAAATGTCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GTGTTTGAGGTTCCCGTTCTTTCCCTTCCCAAGTCTCTGGGGGTGGAAAGGAGGAAGAGATACTAGTTAAA30.13077593722755013No Hit
ATACAGCTGCTTGCTTTAAATTAGTAGATTCTGAAATAGCTTTCCTTGCATGTCTAAAATAAAAGTATTGC30.13077593722755013No Hit
GCAGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGTCAGGAGAATGGCATGAAACCCAGAGGCAGAGCT30.13077593722755013No Hit
CTCTTGAAGAGGAGGCCGCCTCCTCGGGGCTCCAGGCTGGCTTGCCCGCGCTCTTTCTTCCCTCGTGACAG30.13077593722755013No Hit
CGTTTTGAGTGCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GCCCTGAGGACAAGCACTTGCCACCACCGTCACTCAGCCCTGGGCGTAGCCGGACAGGAGGAGAGCAGTGA30.13077593722755013No Hit
GGTAGATAAAGAGGATGAAATTACTGAAAAGAAAGCCAAAAAAGCCAAGATTAAAGTTAAAGTTGAAGAAA30.13077593722755013No Hit
CAGTGGTGTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATCATTTGAGCCTGGGAGGTC30.13077593722755013No Hit
GATTTATGAGGAGACTCGTGGCGTTCTCAAGGTGTTTCTGGAGAACGTGATCCGGGACGCCGTGACCTACC30.13077593722755013No Hit
GATTTATGAGGAGACTCGTGGCGTTCTCAAGGTGTTTCTGGAGAACGTGATCCGGGACGCCGTGACCTACA30.13077593722755013No Hit
AAAATACACTTCCACCCTTTTTTCTAAGTGTTCGTCTTTAGTTTTGATTTTGGAAAGATGTTAAGCATTTA30.13077593722755013No Hit
CTAAGTATGTTTATTCAAGACATTGAAACTACTTTGCACATATGAATATTAATGTAACTTGTAATTTAAAA30.13077593722755013No Hit
GCATCATGTCACTGCAAAGCCGTTGCAGATAAACTTTGTATTTTAATTTGCTTTGGTGATGATTACTGTAT30.13077593722755013No Hit
GAACAATTCACAGTATGAGAAGAAAAATGGAAAAAAAAAACTTTATTTAAAAAAGAAAAAAGTCCAGATTG30.13077593722755013No Hit
AATTTGCACCCGACGATCAAATCCATTAAAAATGAATCTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
CAAATAAAGTTTGAGTTCTAAACTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GTCATAAACAGATGAATAAACTGAATTTGTACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GTTTATAGGATAGTTGTGGTAAGAATCTAGTTTATTTTGCATTTGGCTAATTGGTCTGTGCTGCATGGTTA30.13077593722755013No Hit
TTGATGTACCTTTTCCCTGCCTCACTCCAGGTTTTAGTGAAGTAAACAGTATTTGGAAAGTTAAAAAAAAA30.13077593722755013No Hit
CTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.13077593722755013No Hit
GGAGAGGACATATGAAAACATATTAGCTGGTCATGCTGGAGAAGTTGGGGATCAGAACATCAAAATATGGC30.13077593722755013No Hit

[OK]Adapter Content

Adapter graph