FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36220
Sequences flagged as poor quality0
Sequence length71
%GC38

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8522.352291551628934No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3070.8475980121479845No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGACCCGTATTTACCCTATAG380.1049144119271121No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)