FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17742
Sequences flagged as poor quality0
Sequence length66
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8354.706346522376282No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG990.5579979709164694No Hit
ATAAATACACTATGAGTTACTAAAATATCATGGATTTTGTTTATTCCTGAAACATAGTTACATAGT260.14654492165483035No Hit
GTTACATAGTTAAACTGTACATATGACATGGCTTATGTTAAAAATACCCAGTGCTCAGTTTTGAAA190.10709051967083755No Hit
TTTTTAGAGGGCACATTTTGCTGTAAATCTGGAAATTTGATAGACTTGACTGTGTTTGTGAAAACT190.10709051967083755No Hit
GTTAAGGAACAGGTGATACATTTTCATTTGTTAGAAACTGATCTTTCTGTAATAAAATAGATTTTC180.10145417653026716No Hit
ACTTTAGAGAGAGTAAAATGTGCCAGGAGCCATAGGAATATCTGTATGTTGGATGACTTTAATGCT180.10145417653026716No Hit
GTTTCATATCTGGTCAAGTTGAGATTTTTAAGAACTTCATTTTTAATTTGTAATAAAAGTTTACAA180.10145417653026716No Hit
CTATAAATACACTATGAGTTACTAAAATATCATGGATTTTGTTTATTCCTGAAACATAGTTACATA180.10145417653026716No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)