FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2998
Sequences flagged as poor quality0
Sequence length66
%GC23

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA113637.89192795196798No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG391.3008672448298866No Hit
CCTTGCTTTGTGGTCACTGTAACATTTGGGGGGTGGGACAGGGAGGAAAAGTAACAATAGTCCACA60.20013342228152103No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.20013342228152103No Hit
GTGTATCTTTCACTGATTTCTGAATCATGTTCTAGTTGCTTGACCCTGCCACATGGGTCCAGTGTT60.20013342228152103No Hit
CATTTCCCTACCCTAAAGCGACATCCCAGTAGTGTTTGGAATTTTCTGTTCATAGATATTGGAAGA60.20013342228152103No Hit
GGGTAAAATAAACTCTCCCAGAGTAAGAGCTGTATCGTGAATTGTCATACTAATTATTGAGGGGGA60.20013342228152103No Hit
CATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAAAAAAAAA50.1667778519012675No Hit
ACATAGCAAAAATGCAAAGGTGAACAGGAAGTAAATTTCTGGCTTTTCTGCTGTAAATAGTGAAGG50.1667778519012675No Hit
CCTCAGCACCTGCTGCATCTGGAGCAGCCCAAGCCTCAGGATGGACAAGAGGAAACCCACAGCTCA50.1667778519012675No Hit
TCCCTACACGACGCGGGCTGGAATTGAATAATAGATTGAATGAAATAAAAAACATATTTGAAAGCT50.1667778519012675No Hit
GCTCCACTGTCCTCTGCCAGCCTACAGGAGGAAAAGCAAGGCTTACAGAAGGATGTTCCTTCAGGA40.13342228152101399No Hit
CTGTATTCACCAAGTCTCCCTATCAGGAGTTCACTGACCACCTCGTCAAGACCCACACCAGAGTCT40.13342228152101399No Hit
CTTTTAGGAGGCCGCAGCCTTCCATCACCGGATCAGTTTTTCCTCTTAGGAAAGCTGCAGGAACCT40.13342228152101399No Hit
TACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTTTTGCGAT40.13342228152101399No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC40.13342228152101399No Hit
GGGGATGACACAGAGGAGACAGAGGATTATAGACAGTTCAGGAAGTCAGTCCTCGCAGATCAGGGT40.13342228152101399No Hit
GTATCTAGCCTGGAACCAAGGTTATCTTGGAACTAAATGACTTTTCTCCTCTCAGTGGGTGGTAGC40.13342228152101399No Hit
TTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGGGTAGGCGAGGGTTCGAGGGCACGAG40.13342228152101399No Hit
GTTTGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTACAAAAAATACAAAAAATTAGCTGG40.13342228152101399No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAA40.13342228152101399No Hit
GATTCAGGGGATCTTTGACAGGGATCCAGACACACTACTTTATTTACTTCAGCAAAAGAGTGAGCC40.13342228152101399No Hit
CAGGAGCTCCTTAGTAAAGGACTTATCAAACTGGTTTCAAAGCACAGAGCTCAAGTAATTTACACC40.13342228152101399No Hit
GAGCTGAGATCGCAGCATTTCTCTCCAGCCTGGGCAACAAGAGTGAAACTCCATCTCAAAAATAAA40.13342228152101399No Hit
GGTGGATTGGGAGGTCAAGAGATCGAGACCATCGTGGCTAACATGGTGAAACCCCGTCTCTACTAA30.10006671114076052No Hit
CAAATGTAGGATTTAGGGAAGTCAAGTTAAAAAAAATTAAAACGTTTCAGCACCACCCACAGGTGA30.10006671114076052No Hit
CCCTGTCTCAAATACATACAAACACAACCAATAGCATCAGATTATCTGGGCTCACCCCAGGTCTGC30.10006671114076052No Hit
GGCTTGTTTTCCAAAGAAAAGTATTGTTTGGAGGAGCAAAGTTAAAAGCCTACCTAAGCATATCGT30.10006671114076052No Hit
GGAGTCTTGGATACACTGGGGCTCGCAACTACGCTGGAGCCTATAGAGAATGGTTGGAGAAAGAGA30.10006671114076052No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10006671114076052No Hit
CACTCTGTATTTGAAAATCTTGTTTTTGCTCTTTCCGGAGCTTCACCCCTCTACTTACATATTGTA30.10006671114076052No Hit
ATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAAT30.10006671114076052No Hit
CCTGCTCAATGCTGTCATCGTGCAGCGGTTAACATAACCGCCCAGCCAGCTGCCTGGCCTCCCTCC30.10006671114076052No Hit
GGGCGTCTGTTGCTCCCCTGGGTCACCTCCTCCCTGCTCGCTGACATCTGGGGCTTTGACCCTTTC30.10006671114076052No Hit
GAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACTCTACAACATTACC30.10006671114076052No Hit
CATTTTAGAAGCTTGTGAACACATGACGTCAGATCAAAGAAAACAGATCTTCTCCAGATTGGCAGA30.10006671114076052No Hit
GGTTACAGTCAACTGATTTTAGGCAAATATACAAAAAGCCCCTTAACAGAACAACTAGAGATTTTT30.10006671114076052No Hit
GGCAACAAGTAAAGATTTATTCATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.10006671114076052No Hit
GTTTCTGTATGTTAATGACTTGTTGGGTAGCTATTAAGGTACTAGAGTTGATAAATGTGTACAGGG30.10006671114076052No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC30.10006671114076052No Hit
GGGCAACAGAGCGAGATTCTGTCTCAAAGAAAATTAGCTGGAATCCCAGCTACTTGGGAGGCCGAG30.10006671114076052No Hit
AGTTCACAACCAGCCTGGGCAACATAATGAGACCTAATCGCTATAAAAATTTAAAAATTAGCCTGG30.10006671114076052No Hit
CCCCTACTCTGGAAGCTGAGGTGGGAGGATCACCTAAGCCAGGAAGTTGAGGCTGCAGTGAGCCAA30.10006671114076052No Hit
TTCCTGGAGACTCACTTCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCACCTGACC30.10006671114076052No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)