FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7637
Sequences flagged as poor quality0
Sequence length66
%GC20

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA308740.421631530705774No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG210.27497708524289644No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC210.27497708524289644No Hit
GGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGA130.1702239099122692No Hit
CTCTAGAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA120.1571297629959408No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA100.130941469163284No Hit
CTACACGACAACACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.11784732224695563No Hit
GGACAAAGCACAGCAGAACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCT80.10475317533062721No Hit
GTGTAGAAGGTAATTTACTACACTTATAAAATAGTGTGACTTTTGTGAAAATTTTGAATTAGCTTT80.10475317533062721No Hit
GTATATAAATATGTAAATACATGCTTTAATTTGCAATTTAAAATGAAGGGGTTAAATAAGTTAGAC80.10475317533062721No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)