FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002882623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002882623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6412
Sequences flagged as poor quality0
Sequence length66
%GC20

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA271042.26450405489707No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA190.29631940112289457No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG160.2495321272613849No Hit
CTTGTAATCCCAGCACTTTGGGATGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGATCA100.1559575795383656No Hit
GTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCC80.12476606363069245No Hit
ACTGACAACCTCAGCTGGCATCATGGACCATGAAGAAGCAAGACGAAAACACACAGGAGGGAAAAT70.10917030567685589No Hit
GCCTCAGCCTCCCAAGCAGCTGGGATTACAGGTGCATGCAACAGCACCTGTAATCCCAGCTGCTTG70.10917030567685589No Hit
CCTCATGACATCATCGATGACATCAACAGTGGTGCTGTGGAATGCCCAGCCAGTTAAGCACAAAGG70.10917030567685589No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)