FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002883089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002883089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96490
Sequences flagged as poor quality0
Sequence length71
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2180.2259301482018862No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2170.22489377137527206No Hit
CTCCTGGAATCCCAGCACTTTGGGAGCCCGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACTGTTCTG1310.13576536428645455No Hit
GTGTATGTACATATATATATTTTTTAATTTGATGAAAGCTGATTACTGTCAATAAACAGCTTCATGCCTTT1110.1150378277541714No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)