FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002883158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002883158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3918
Sequences flagged as poor quality0
Sequence length66
%GC15

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA195149.79581419091373No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA150.38284839203675347No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG150.38284839203675347No Hit
GTTGTCTCTGATGCAGCTTATACGAAATAATTGTTGTTCTGTTAACTGAATACCACTCTGTAATTG80.20418580908626852No Hit
GTATATTGTCAGTATTCTTCTGGTTCAGCATACCTTATAGTTCATATATAACCTGTATTAATTGTA60.1531393568147014No Hit
AAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA50.1276161306789178No Hit
GTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10209290454313426No Hit
CATCTAATCTGAAGGGTAGCTGCAGTGAACTAAACTGGGCCATTAAGAGTACCTGTTTTTATTAGG40.10209290454313426No Hit
GTTTGTCATGGAAATGTAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTAATGTCAGGAAT40.10209290454313426No Hit
AAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.10209290454313426No Hit
GGGTAGCTGCAGTGAACTAAACTGGGCCATTAAGAGTACCTGTTTTTATTAGGTCTATATCTTCTC40.10209290454313426No Hit
GAGCCACAGCCACTCACTGCATTCTCAGAATTCTATCCTACCACCCCAAAGATTGACCTGAAAGAG40.10209290454313426No Hit
GTACCTGTTTTTATTAGGTCTATATCTTCTCTAACTAAATCAGGGGAAATCTGTTCTGCCTATCTC40.10209290454313426No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC40.10209290454313426No Hit
GTAATTCCAGCTACTGGGGAGGCTGAGGCAGAAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG40.10209290454313426No Hit
CCTCGTAATACCATCATATTGGGGGTATGGATTCCAATATATGAATTTATGTGGGGGAGGGGGGCA40.10209290454313426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)