FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003030398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003030398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences244
Sequences flagged as poor quality0
Sequence length223-233
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGTCTCTTCCCCACAACAATATTCATGTGCCTAGACCAAGAAGTTATTA135.327868852459016No Hit
GACGCACTCTCCCCTGAACTCTACACAACATATTTTGTCACCAAGACCCT135.327868852459016No Hit
CTCTCCTTGCAAAGTTATTTCTAGTTAATTCATTATGCAGAAGGTATAGG124.918032786885246No Hit
CACTTAAACACATCTCTGCCAAACCCCAAAAACAAAGAACCCTAACACCA104.098360655737705No Hit
TATCATAGAAGAGCTTATCACCTTTCATGATCACGCCCTCATAATCATTT93.6885245901639343No Hit
CATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAATCACT83.278688524590164No Hit
GGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCACGGTTAGGGT72.8688524590163933No Hit
CATCTTTCTTTTCACCGTAGGTGGCCTGACTGGCATTGTATTAGCAAACT72.8688524590163933No Hit
AGCCTTCTCCACTTCAAGTCAACTAGGACTCATAATAGTTACAATCGGCA72.8688524590163933No Hit
TACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCT62.459016393442623No Hit
GATAAGGGGTGTAGGTGTGCCTTGTGGTAAGAAGTGGGCTAGGGCATTTT62.459016393442623No Hit
TCAACAAAACTGCTCGCCAGAACACTACGAGCCACAGCTTAAAACTCAAA62.459016393442623No Hit
CCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAA62.459016393442623No Hit
GATGAATCCTAGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTC62.459016393442623No Hit
CTCGCATCTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTA62.459016393442623No Hit
ACTCCTACCTATCTCCCCTTTTATACTAATAATCTTATAGAAATTTAGGT52.0491803278688523No Hit
CAATGACCCCAATACGCAAAATTAACCCCCTAATAAAATTAATTAACCAC52.0491803278688523No Hit
CATTATGATTATTAATGATGAGTATTGATTGGTAGTATTGGTTATGGTTC52.0491803278688523No Hit
GAGGGCAATTTCTAGATCAAATAATAAGAAGGTAATAGCTACTAAGAAGA52.0491803278688523No Hit
ATTGTCTGGGTCGCCTAGGAGGTCTGGTGAGAATAGTGTTAATGTCATTA41.639344262295082No Hit
CCTGCCCCTACTCCTCCTAGACCTAACCTGACTAGAAAAGCTATTACCTA41.639344262295082No Hit
TAGAAGTAGGGTCTTGGTGACAAAATATGTTGTGTAGAGTTCAGGGGAGA41.639344262295082No Hit
AGGGGCAGGTTTTGGCTCGTAAGAAGGCCTAGATAGGGGATTGTGCGGTG41.639344262295082No Hit
CAGGTGGTCAAGTATTTATGGTACCGTACAATATTCATGGTGGCTGGCAG41.639344262295082No Hit
TTGTTTTCTATTAGACTATGGTGAGCTCAGGTGATTGATACTCCTGATGC41.639344262295082No Hit
CGCCCACGGGCTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAACT41.639344262295082No Hit
CCCCCTCTACCCCCTCTAGAGCCCACTGTAAAGCTAACTTAGCATTAACC31.2295081967213115No Hit
CTAGCCCCTACCCCCCAATTAGGAGGGCACTGGCCCCCAACAGGCATCAC31.2295081967213115No Hit
TCCGGCCTCCACTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTA31.2295081967213115No Hit
CAATGACCCCAATACGCAAAACTAACCCCCTAATAAAATTAATTAACCAC20.819672131147541No Hit
GGTGATAAGCTCTTCTATGATAGGGGAAGTAGCGTCTTGTAGACCTACTT20.819672131147541No Hit
GGAGAGCCAAAGCTAAGACCCCCGAAACCAGACGAGCTACCTAAGAACAG20.819672131147541No Hit
TGCGATTAGAATGGGTACAATGAGGAGTAGGAGGTTGGCCATGGGTATGT20.819672131147541No Hit
TTGGCTTGCCATGATTGTGAGGGGTAGGAGTCAGGTAGTTAGTATTAGGA20.819672131147541No Hit
CATTGTACCCATTCTAATCGCAATGGCATTCCTAATGCTTACCGAACGAA20.819672131147541No Hit
TAACCAATACTACCAATCAATACTCATCATTAATAATCATAATGGCTATA20.819672131147541No Hit
GTCATTGGTGTTCTTGTAGTTGAAATACAACGATGGTTTTTCATATCATT20.819672131147541No Hit
AAGGCTACGATTTTTTTGATGTCATTTTGTGTAAGGGCGCAGACTGCTGC20.819672131147541No Hit
ACTCCTACCTATCTCCCCTCTTATACTAATAATCTCATAGAAATTTAGTT10.4098360655737705No Hit
GATAAATCCTAGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTC10.4098360655737705No Hit
CAATTAAACACATCTCTCCCAAACCCAAAAAACAAAGCACACTAACACAA10.4098360655737705No Hit
CACAGGTGCTGTGGGTGAAGGAGTCTTTGGGTGGCGGTCCATCGCCACTC10.4098360655737705No Hit
CTTTGTACCCATTCTAATCGCAATGGCATTCCTAATGCTTACCGAACGAA10.4098360655737705No Hit
ATGGGGTGTTGAGGGTTATGAGAGTAGAGACCAGGTTGAAACATCGCCAC10.4098360655737705No Hit
TTTAAGTGCTGTGGCCAGAAGCGGGGGGAGGGGGGGGGTTGGTGGAAGGT10.4098360655737705No Hit
CCCGTGAGCGATTATGAGAATGACTGCGCCGGTGAAGCTTCAGGGGGTTT10.4098360655737705No Hit
TTTAAGTGCTGTGGCCAGAAGCGGGGGGAGGGGGGGGGCTTGGTGGAAAT10.4098360655737705No Hit
TCGTGGTGCTGTGGGTGAAAGAGTGAAAAGTTTACCCACCATCGCCACTC10.4098360655737705No Hit
AGCGTTCTCCACTTCAAGTAAACTAAGACTCATAATAGTTACAATCGGCA10.4098360655737705No Hit
GTAAAATGGCTGCTGTGTTGGCATTCCGTCAAACAACGTCATCGCCACTC10.4098360655737705No Hit
CATGTTTACCGGCCGGGGTACCCTAACCGGGCAAGGGAAGCATAATCACT10.4098360655737705No Hit
GATGAATCCTAGTGCTCAGAGCACTGAAGCAGATCATTTAATATTGCTTC10.4098360655737705No Hit
CCTGCCCCTACTCCTCCTAGACCTAACCTGACTAGAAAAGCTATTACGTA10.4098360655737705No Hit
CATTATGATTATTAATGATGAGTATTGATTGGTAGTATTGGTTCTGGTTC10.4098360655737705No Hit
CAGGTGGTCAAGTATTTATGGTACCGTACAATATTCATGGTGGCTGGTAG10.4098360655737705No Hit
AGGGGGTGTTATAGGGTAAATACGGGCCCGATTTGATAGTTTATTAGGGG10.4098360655737705No Hit
TCCGTGGGCGATTATGAGAATGACTGCGCCGGTGAAGCTTCAGGGGGTTT10.4098360655737705No Hit
CGCCCACGGACTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAACT10.4098360655737705No Hit
AAGGCTACGATTTTTTTGTTGTCATTTTGTGTAAGGGCGCAGACTGCTGC10.4098360655737705No Hit
TACCTTCTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTACCAT10.4098360655737705No Hit
TACCTTCTTATTATTTGATCTAGAAATTACCCTCCTTTTACCCTACCATG10.4098360655737705No Hit
GTAAAATGGCTGCTGTGTTGGCATGAATACCCTAAAACCCATCGCCACTC10.4098360655737705No Hit
AACCCCCCTCCTAATACTAACTACCTGACTCCTACCCCTCACAATCATGG10.4098360655737705No Hit
GATTTAACTGTTGAGGTTTAGGGCTAAGCATAGTGGGGTATCTAATCCCA10.4098360655737705No Hit
TAGAAGTAGGGTCTTGGTGACAAAATATGTTGCGTAGAGTTCAGGGGAGA10.4098360655737705No Hit
GGAGAACCAAAGCTAAGACCCCCGAAACCAGACGAGCTTCCTAAGAACAG10.4098360655737705No Hit
CCCCCTCTACCCCCTCTAGACCCCACTGTAAAGCTAACTTAACATTAACC10.4098360655737705No Hit
TCAACCAAACTGCTCGCCAGAGCACTACGAGCCACAGCCTAATCCTCAAA10.4098360655737705No Hit
AATAAATCCTAGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTC10.4098360655737705No Hit
CAGTCTCTTCCCCACAACAATATTCATGTGCCTAGACCAAGAAGTTATTC10.4098360655737705No Hit
ATGGGTGTTGAGGGTTATGAGAGTACCATACTTAGAAGATCATCGCCACT10.4098360655737705No Hit
ATGGGTGTTGAGGGTTATGAGAGTATACCGTGGGCTCGTTCATCGCCACT10.4098360655737705No Hit
CAATGACCCCAATACGCAAAATTAACCCCCTAATAAAACTAATTAACCAC10.4098360655737705No Hit
TCCCCCAGGCTCCTGGCAGCTCTAGGCAATATCAAGCCTCCTAGAGAGGA10.4098360655737705No Hit
CACGTGGGCGATTATGAGAATGACTGCGCCGGTGAAGCTTCAGGGGGTAT10.4098360655737705No Hit
GGAATCACCTCCCATTCCGATAAAATCACCTTCCACCCTTACTACACAAT10.4098360655737705No Hit
CACCCACGGACTTACATCCTCATTACTATTCTGCCTAGCAAACTCAAACT10.4098360655737705No Hit
TACTTGACCACCTGTAGTACATAAAAACCCAATCCACATCAAAACCCCCC10.4098360655737705No Hit
TTGGCTTGCCATGACTGTGAGGGGTAGGAGTCAGGTAGTTAGTATTAGGA10.4098360655737705No Hit
GACGCACTCTCCCCCGAACTCTACACAACATATTTTGTCACCAAGACCCT10.4098360655737705No Hit
ATGGGGTGTTGAGGGTTATGAGAGTAGCTACTATATATAAACATCGCCAC10.4098360655737705No Hit
GATGATTAGTTCTTCTATGATAGGAGAAGTAGCGTCTTGTAGACCTACTT10.4098360655737705No Hit
ACTCCTACCTATCTCCCCTTTTTTACTAATAATCTTATAGAAATTTAGGT10.4098360655737705No Hit
ACTCCTCCCTATCTCCCCTTTTATACTAATAATCTTATAGAAATTTAGGT10.4098360655737705No Hit
CAATGACCCCAATACGCAAAATTAACCCCCTAATAAAATTAATTAACCGC10.4098360655737705No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)