FastQCFastQC Report
Thu 16 Jun 2022
EGAF00003056913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003056913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53085159
Sequences flagged as poor quality0
Sequence length150-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA893690.16835025397588052No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA660970.12451125935216659No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG583020.10982730597077048No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)