FastQCFastQC Report
Mon 5 Sep 2022
EGAF00003057804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003057804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9463322
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG182700.19306116816061No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA163620.17289911513102904No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC114930.12144783829610786No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)