FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003248386

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003248386
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428089685
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1615550.031.1523461
TCGGAAG1706850.029.4768472
CGGAAGA1891700.026.5262493
TATGCCG758200.014.31328945-49
AGAGCAC4232500.012.4841347
CGTATGC890800.012.1989645-49
CTCGTAT840200.011.93451940-44
AGCACAC4531900.011.5665119
GAGCACA4659200.011.3828048
TCTCGTA884000.011.31859340-44
GAAGAGC4844150.011.0380065
ATGCCGT1014300.010.75222445-49
GCCGTCT1012450.010.63754450-54
GTCACGA1031950.010.62627225-29
TATCTCG943050.010.58834440-44
TGCCGTC972300.010.405478545-49
ACGAGTG1163900.09.49669830-34
TCGTATG1003000.09.35846140-44
ATCTCGT1100450.09.2649140-44
CACGAGT1215400.08.995275530-34
Produced by FastQC (version 0.11.5)