FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003248390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003248390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406376344
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1319150.017.4599441
TCGGAAG1443800.016.0399072
CGGAAGA1634150.014.2149843
TATGCCG521300.09.63880145-49
CGTATGC634150.08.22760140-44
ACGGCTA622400.08.17292530-34
CTCGTAT605750.07.94783240-44
CGGCTAC649250.07.9443730-34
TCTCGTA657850.07.296341440-44
TGCCGTC760000.07.01978345-49
ATGCCGT779650.06.813145-49
GCCGTCT806150.06.693469545-49
TCGTATG759900.06.56838340-44
AGAGCAC3929000.06.4297557
AGCACAC4097100.06.2544239
GTCACGG884400.06.01803825-29
GAGCACA4290650.05.9334218
GAAGAGC4601100.05.73630765
AGTCACG1005650.05.43806125-29
ATCTCGT877950.05.369732435-39
Produced by FastQC (version 0.11.5)