FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003248391

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003248391
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406376344
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG851450.024.6351819
GAGCGTC1167450.018.1223478
ATCGGAA1447400.015.3982531
AGAGCGT1440250.014.9515327
TCGGAAG1563650.014.266572
CGGAAGA1761350.012.7872923
AAGAGCG1773450.012.647656
CGCCGTA357350.012.22347745-49
GTCGCCG502100.09.363749540-44
TCGCCGT445800.09.08613940-44
GCCGTAT589400.07.88574745-49
GGTCGCC656950.07.40818940-44
TGGTCGC658350.07.2713240-44
CCGTATC708100.06.711255645-49
GTGGTCG764700.06.36623440-44
CGTATCA774600.06.34657945-49
GCGTCGT791850.05.753682610-14
CGTCGTG819950.05.600713310-14
GAAGAGC4626900.05.46222455
TCGGTGG1072350.05.06305635-39
Produced by FastQC (version 0.11.5)