FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003248412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003248412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438846875
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1651600.033.402471
TCGGAAG1774700.030.9518262
CGGAAGA1947850.028.2563383
TATGCCG814450.014.30413845-49
AGAGCAC4475100.012.7816447
CGTATGC933400.012.41912945-49
AGCACAC4717900.012.1883689
CTCGTAT882000.011.93581540-44
GAGCACA4860350.011.8371098
GAAGAGC5102450.011.3433115
TCTCGTA934700.011.32489140-44
ATGCCGT1088400.010.86762345-49
GCCGTCT1096750.010.63716350-54
TGCCGTC1046750.010.5950945-49
TCGTATG1034300.09.76901340-44
ATCTCGT1155500.09.35657340-44
CGTCTTC1370150.08.76856750-54
CCGTCTT1390450.08.61448450-54
CGTCTGA1487700.07.947886515-19
AAGAGCA7597600.07.9156086
Produced by FastQC (version 0.11.5)