FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003249295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003249295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences316810284
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1748350.025.9709289
GAGCGTC2151300.021.3119478
ATCGGAA2327950.019.5468851
AGAGCGT2441450.018.9071627
TCGGAAG2443100.018.7796962
CGGAAGA2559550.017.9979463
AAGAGCG2852950.016.2972186
GAAGAGC4746200.010.1918025
CGCCGTA937300.09.77408255-59
TCGCCGT1026500.09.00243555-59
GCCGTAT1090950.08.53040955-59
CCGTATC1176500.07.96557755-59
CGTATCA1215650.07.805030360-64
GTCGCCG1300550.07.330670455-59
GGAAGAG7179300.07.0093744
TGGTCGC1461550.06.589373650-54
GTGGTCG1483450.06.52239550-54
GGTCGCC1585800.06.114230650-54
TCTCGGT1670550.05.907582345-49
TCGGTGG1726700.05.72471345-49
Produced by FastQC (version 0.11.5)