FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003249407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003249407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486239476
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG3115850.017.4182139
GAGCGTC3764950.014.5730878
ATCGGAA4016450.013.5890231
AGAGCGT4240150.012.9689227
TCGGAAG4245150.012.9453222
CGGAAGA4365200.012.5876843
AAGAGCG4923850.011.2963146
GAAGAGC7855100.07.4925985
CGCCGTA1757000.06.38833455-59
TCGCCGT1887600.05.96707355-59
GCCGTAT1971350.05.84374255-59
CCGTATC2091700.05.547711455-59
CGTATCA2131300.05.495617460-64
GGAAGAG11846650.05.25196364
Produced by FastQC (version 0.11.5)