FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003249800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003249800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477312693
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA912150.033.474731
TCGGAAG1071150.028.5953962
CGGAAGA1301950.023.6277623
TATGCCG688150.09.27997145-49
CTCGTAT703900.08.59523240-44
AGAGCAC3967300.08.3570627
TCTCGTA749600.08.09442640-44
CGCTCAT822750.07.88031130-34
AGCACAC4297300.07.85362679
TATCTCG799700.07.659841540-44
GAGCACA4584850.07.39426668
GAAGAGC4664200.07.2637785
CGTATGC915300.07.14643545-49
ATGCCGT939050.07.10154745-49
ACCGCTC941300.07.02954230-34
GTCACCG966200.06.867791725-29
ACACGTC1019500.06.56372610-14
TGCCGTC1017550.06.535168645-49
CCGCTCA1035450.06.366566730-34
ATCTCGT1003550.06.31483440-44
Produced by FastQC (version 0.11.5)