FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003249806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003249806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402656676
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1376350.017.1613561
TCGGAAG1482600.015.9666422
CGGAAGA1674100.014.18199353
TATGCCG588850.08.56871445-49
CGTATGC713750.07.36545340-44
CTCGTAT678650.07.026447340-44
AGAGCAC3933700.06.6331627
TCTCGTA714100.06.618755340-44
TGCCGTC820550.06.499018745-49
AGCACAC4132500.06.352659
ATGCCGT839900.06.30786145-49
GCCGTCT854300.06.210021545-49
GAGCACA4334350.06.10697468
TCGTATG802650.06.094479640-44
GAAGAGC4572900.05.86616955
Produced by FastQC (version 0.11.5)