FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003249808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003249808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405393693
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1385800.016.4224591
TCGGAAG1503600.015.3608952
CGGAAGA1705450.013.5130253
TATGCCG590350.08.382345-49
CGTATGC710400.07.207341740-44
CTCGTAT683500.06.80787440-44
TCTCGTA724500.06.42461340-44
TGCCGTC816100.06.38692845-49
AGAGCAC3985250.06.3092327
ATGCCGT838300.06.1728245-49
AGCACAC4188100.06.0711419
GCCGTCT862150.06.003740345-49
TCGTATG811150.05.88132340-44
GAGCACA4374600.05.80899958
GAAGAGC4591650.05.64960245
Produced by FastQC (version 0.11.5)