FastQCFastQC Report
Tue 19 Apr 2022
EGAF00003249874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003249874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402482428
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA2183850.030.3176861
TCGGAAG2295250.028.9100882
CGGAAGA2457850.026.9700363
AGAGCAC4658100.014.6707717
AGCACAC4898750.013.9797919
TATGCCG982250.013.7240745-49
GAGCACA5025700.013.6598498
GAAGAGC5276050.013.0665175
CGTATGC1105750.012.39817440-44
CTCGTAT1035400.011.754765540-44
TGCCGTC1208300.011.34735845-49
ATGCCGT1222900.011.20832745-49
GCCGTCT1242450.011.02729545-49
TCTCGTA1090700.011.01919840-44
TCGTATG1167650.010.57117140-44
AAGAGCA7489800.09.5141846
CGTCTTC1476150.09.37951150-54
TCACGAT1473750.09.11939230-34
ATCTCGT1321600.09.08486935-39
CCGTCTT1524450.08.90371345-49
Produced by FastQC (version 0.11.5)