Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003250195 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 116380339 |
Sequences flagged as poor quality | 0 |
Sequence length | 85 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTAGGCATCTCGTATGC | 1174725 | 1.0093844115714425 | RNA PCR Primer, Index 3 (100% over 50bp) |
ATGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTAGGCATCTCGTATG | 308731 | 0.2652776256305629 | RNA PCR Primer, Index 3 (100% over 49bp) |
CCCGAGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTAGGCATCTC | 137409 | 0.1180689119663073 | RNA PCR Primer, Index 3 (100% over 44bp) |
GCACCCTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTAGGCATCTC | 130524 | 0.11215296425627357 | RNA PCR Primer, Index 3 (100% over 44bp) |