FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003289899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003289899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3256
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTTCTCAGTAGCTCAGGTTATTTGAAGCATTATTCTGTCATGTGTCTG60.18427518427518427No Hit
AGAAGAGTAGCTCAAGGGCAGTCTCTGTCCCCGGCAGGATGGGCCCAGCC60.18427518427518427No Hit
GAGTAGGTAGCTCATGTGTGTAACACCACCGACCTGCATGCCTGCACCAG40.12285012285012285No Hit
CAACACAGTAGCTCAAGTGGTCAGTTCCCTTCAGTCCCACAAGAAGCTTC40.12285012285012285No Hit
TGGGATTCAGTAGCTCATGTGAAGACAGGGCTTCTGATACAGAAAAAGGA40.12285012285012285No Hit
CCCCGCGTAGCTCACCCAGGGGGCTGGGGCACAGAAAAGAGCTGAGCGGC40.12285012285012285No Hit
TGTTGGGTAGCTCACCCTGCCCTGCAGGGTCCTGAGAATGGAAGAGTTTT40.12285012285012285No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)