FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003289900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003289900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3306
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTCGTAGCTCACACAGCATCTACTGCAGATTCTGAGACCACCTCAGC50.1512401693889897No Hit
TGTTGGAGTAGCTCATGAAGAAACTAACAAGGAAGCATGGGGACCTGCCA50.1512401693889897No Hit
CAGGGCTCAGTAGCTCATCCCTGTTGTCAGCATCTCCACCTTCTACAAAA40.12099213551119178No Hit
TAGGTACAGTAGCTCATCAGAGGCCGCCGTGGGGTCATGAGGCTCACAGC40.12099213551119178No Hit
CTTTGGAGTAGCTCAAAATGGGGGTACGATGGCACCTCCCACCTTGCTGG40.12099213551119178No Hit
GTAAGGGTAGCTCACCTGCAGGGCCTCGTAGTCCAGGGACCTGAGGGCAA40.12099213551119178No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)